Phaeobacter porticola: PhaeoP97_00923
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Entry
PhaeoP97_00923 CDS
T04595
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
php
Phaeobacter porticola
Pathway
php00470
D-Amino acid metabolism
php00550
Peptidoglycan biosynthesis
php01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
php00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PhaeoP97_00923 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PhaeoP97_00923 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
php01011
]
PhaeoP97_00923 (murD)
Enzymes [BR:
php01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PhaeoP97_00923 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
php01011
]
Precursor biosynthesis
Amino acid ligase
PhaeoP97_00923 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
APG46350
UniProt:
A0A1L3I2K8
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All DBs
Position
924856..926253
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AA seq
465 aa
AA seq
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MIPVTGFEGAKVAVLGLGRSGFATARALREGGAEPVCWDDNPGARARAEVEGFVCRDLLK
AGAFDDIASLVVSPGIPHLYPKPNPVIRAAMVAGVPVDNDIGLFFRSVATRGWERFDQAP
RIVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGSGGIVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLFAEGGPDRAIIGVDEDEGLYLAG
QLAEASSDDRVIRVSASQKLTGPGWQVFARKGFLSEYRKGRQAASIDLRQMQGLPGAHNH
QNACAAYAAARALGLAPRLIEDALASYPGLPHRSQTIATHAGVRYVNDSKATNLDSAVKA
LSAFDNIRWICGGLEKDGGLEALRGQTGKVRKAYVIGREAAGFAMQLDVEAEVCITMAEA
VARASAEAETGDTVLLAPAAASFDQYDNFEQRGEDFIAEVAKLRG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttacaggttttgagggcgcaaaggtcgccgttttggggctgggccggtcg
ggatttgccaccgctcgggcgctgcgcgaaggcggggcggagcctgtctgttgggacgac
aaccctggcgcgcgggcgcgggccgaggtggaggggtttgtctgccgcgatctgctgaaa
gccggggcgtttgatgacatcgcctcgctggtcgtctcgccgggtattccgcatctctat
cccaaacccaatccggtgatccgcgcggcgatggtcgcgggtgtgccggtggacaatgac
atcgggctgttcttccgctcggttgcgacgcggggctgggaacggttcgatcaggcgccg
cgtattgtggcggtcactggctctaacggcaaatcgaccacggtggcgttgctgcaccac
atcctgcaggaggccggacgcgagagccagctggcgggcaatatcgggcgtggtgtgctg
gacattgatccgccgggatccggcggcatcgtggtgctggagctgtcgagctatcagacc
gatctggcccgcgccctgacgccggatgtggcggtcttcaccaacctcagccccgatcat
ctggaccggcacgcgggcatgggcggctatttcgcggccaagcgacggctgtttgccgaa
ggcgggccggaccgtgcgatcattggcgtggacgaggatgaggggctgtatctggcgggc
caactggcagaggcctctagcgacgatcgcgtcattcgtgtctcggccagtcagaagttg
accggcccgggctggcaggtctttgcccgcaaggggttcctgagcgaataccgcaagggc
cgacaggcggcgtcgattgatctgcgccagatgcaggggctgccgggggcgcataaccat
cagaacgcctgtgcggcctatgcggcggcgcgggcgctgggtcttgcgccccgtctgatc
gaggacgcactggcgagctatccgggcctgccgcaccgcagccagaccatcgcgacccac
gcaggcgtgcgctatgtgaatgacagcaaggccaccaaccttgatagtgcggtgaaggcc
ttgagcgcctttgacaatatccgctggatctgcggcgggctggagaaagacggcgggctg
gaggccctgcgtggccagactggcaaggtgcgcaaggcctatgtcatcggccgcgaggcg
gcgggctttgccatgcagctggatgtggaggcagaggtctgtatcaccatggccgaagcc
gtcgcccgcgccagcgccgaggcagagacgggcgatacggttctgctggcccctgcggcg
gcgagctttgaccaatacgacaacttcgagcaacgcggcgaggatttcatcgctgaggtg
gcaaagctgcggggctga
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