Phaeobacter porticola: PhaeoP97_02307
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Entry
PhaeoP97_02307 CDS
T04595
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
php
Phaeobacter porticola
Brite
KEGG Orthology (KO) [BR:
php00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
php03009
]
PhaeoP97_02307 (rimO)
Enzymes [BR:
php01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PhaeoP97_02307 (rimO)
Ribosome biogenesis [BR:
php03009
]
Prokaryotic type
ribosomal protein modification factors
PhaeoP97_02307 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
DUF6802
TRAM
Motif
Other DBs
NCBI-ProteinID:
APG47701
UniProt:
A0A1L3I6P2
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All DBs
Position
2374864..2376282
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AA seq
472 aa
AA seq
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MTQTPGSTNPPSLRPDLAPKPRLGDAPRDGQPTLGMVSLGCPKALVDSERILTRLRAEGY
GVSPDYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIRAHHPR
ILAVTGPHQYEQVLDAVHAAVPPSPNPYVDLLPAAGVKLTPRHFSYLKISEGCNHKCKFC
IIPDMRGKLASRPAHAILREAEKLVDAGVRELLVISQDTSAYGLDRKYDVNPWKDGDVRS
HIQDLSRELGRLAPADELWVRLHYVYPYPYVRDLIPLMADPNNALLPYLDIPFQHAHPDV
LRRMARPAAAAKTLDEIRAWRATCPDITLRSTFIVGFPGETEAEFQHLLDWMDEAQLDRV
GCFKYENVDGARSNDLADHVPEEIKQQRWERFMEKAQAISEAKLEAKVGQTLQVIVDDID
EDGIATCRTKADAPEIDGNLFIDESTDGLQVGELVTVEVDEAGEYDLWGKRT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacacccggttccaccaatccgcccagccttcgccccgatcttgcgcccaag
ccccggcttggcgatgcgccccgtgacgggcagccaacccttggcatggtgtcactgggc
tgtcccaaggcgctggtcgatagcgagcggatcctgacgcgcctgcgcgccgagggctat
ggcgtgtcacccgattatgccggagccgatgcggtgatcgtcaacacctgcggctttctc
gacagtgccaaagccgagagcctggaggccattggcgaggcgctgaaggaaaacggcaag
gtgattgtcaccggctgtctgggcgctgaaccggactatatccgcgcgcatcatccgcgt
attctagcggtgaccggcccgcatcaatatgagcaggtgctggatgcggtgcatgccgct
gtgccgccctcgcccaacccctacgtagatctgctgcccgctgcgggcgtcaagctgacg
ccgcgccatttcagctatctaaagatctccgagggctgcaatcacaagtgcaaattctgc
atcatccccgacatgcgcggcaaactggcgtcccggcccgcccatgcgattttgcgcgag
gcggagaaactggtggatgccggcgtgcgcgagttgttggtgatttcgcaggatacctct
gcctatgggctggatcgcaaatatgatgtgaatccttggaaagacggcgacgtgcgcagc
cacattcaggatctcagccgtgagctgggccgattggcccccgcggatgagctgtgggtg
cggctgcactatgtctatccctacccttatgtgcgcgatctaatcccgttgatggcggac
ccgaacaatgcgctgctgccctatctggacatcccgtttcaacacgctcaccccgatgtg
ctgcgccgcatggcacggcctgccgctgcagccaaaacactggatgaaatccgcgcctgg
cgcgcgacctgccccgatatcaccctgcgctctacctttatcgttggttttcccggcgag
acggaggccgagttccagcatctgctcgactggatggacgaggcgcagctggatcgcgtt
ggctgttttaaatatgagaacgtcgatggtgctcggtcgaacgatctggccgatcacgtg
ccggaagagatcaagcaacagcgctgggagcgctttatggaaaaggcacaggcgatttcc
gaagcgaagctagaggccaaagtcggccagacccttcaggtgatcgtggatgacatcgac
gaagacggcatcgccacctgccgcaccaaagccgacgcgccagagatcgacggcaacctg
ttcattgacgaaagcaccgacgggttgcaggtcggcgagttggtcaccgttgaagttgat
gaggcgggggagtatgatttgtggggaaaacgtacttaa
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