Phaeobacter porticola: PhaeoP97_03201
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Entry
PhaeoP97_03201 CDS
T04595
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
php
Phaeobacter porticola
Brite
KEGG Orthology (KO) [BR:
php00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
php03016
]
PhaeoP97_03201
Enzymes [BR:
php01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PhaeoP97_03201
Transfer RNA biogenesis [BR:
php03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PhaeoP97_03201
Prokaryotic type
PhaeoP97_03201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APG48561
UniProt:
A0A1L3I904
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All DBs
Position
3295513..3296436
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AA seq
307 aa
AA seq
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MTLGYDMGRKRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPEATGVL
AVALGEATKTVPYITDALKAYTFNVRLGQATNTDDAEGEVIASSDARPSDAEIIAALPQF
LGDIMQVPPKFSAVKIDGQRAYKLARAGEEVELAARPLWVEELTLVDRPDADHVILEMTC
GKGGYVRSIARDLGAALGCYGHVKCLRRIWSGPFDAEDGISLETLDEMAKSPDLDGFLRP
LEEGLADLPQLTCTPEGAAKLRNGNPGMVLASDVEYGEEAWASLDGQAVAVGHYKAGELH
PSRVFVR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacattggggtacgacatgggacgcaaacgcaaggggcgcgatatatccggctggctg
gtggtcgataaacccgcaggcctgacgtccaccgcggttgtaaacaaggtccgctgggcc
tttgacgccaagaaggctggccatgccggcaccctggaccccgaagcaaccggtgtattg
gctgtggcacttggcgaagcgaccaagaccgtgccctacatcaccgacgcgctaaaggcc
tatacgtttaacgtacggttgggacaggccaccaacaccgatgatgcagagggcgaagtc
attgccagcagcgatgcccgccccagcgacgccgagatcattgcggccctgccgcagttt
ctgggcgacatcatgcaggtgccaccgaagttctccgctgtgaagatcgacggccagcgc
gcctataagctggcacgcgctggcgaagaggttgagttggcggcccgcccgctttgggta
gaggagctgactttggtggatcgccctgatgcggatcacgtcattctggaaatgacctgc
ggcaaaggtggctatgtgagatccattgcacgggacctgggtgccgcccttggttgctat
ggtcacgtaaagtgcctgcgccggatctggtccggcccatttgatgcagaagacggcatc
agcctggagactctggacgagatggcaaaatcaccagatcttgatggcttcctgcgcccg
ctagaggaaggtcttgccgatttgccacagctgacctgtacccctgaaggggccgcaaaa
ctgcgcaatggcaaccctggtatggtcttggcttcagacgtggaatacggcgaggaggct
tgggcatccctggatggccaggctgttgccgtgggccattacaaggcaggcgaattacat
ccaagtcgcgtgtttgtacgctaa
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