Phaeobacter porticola: PhaeoP97_03435
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Entry
PhaeoP97_03435 CDS
T04595
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
php
Phaeobacter porticola
Pathway
php03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
php00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PhaeoP97_03435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
php03021
]
PhaeoP97_03435
03019 Messenger RNA biogenesis [BR:
php03019
]
PhaeoP97_03435
Transcription machinery [BR:
php03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PhaeoP97_03435
Messenger RNA biogenesis [BR:
php03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PhaeoP97_03435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_25
OB_RNB
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
APG48788
UniProt:
A0A1L3I9I0
LinkDB
All DBs
Position
3524235..3525506
Genome browser
AA seq
423 aa
AA seq
DB search
MTVQSLNLSDLKANSPKDLLSMAEELEIENASTMRKGEMMFQILRERADEGWEIAGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQYSLRTGDTVEGQIKSPLENERYFALTS
VTKINFEEPEKARHKIAFDNLTPLYPDERLKMEIEDPTIKDRSARVIDLVSPIGKGQRSL
IVAPPRTGKTVILQNIAHSIAKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVDKGDLAKTFVLRRILNPMGTTDAIEFLLSKLKQTKTNSEFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcaatccctgaacctttccgatcttaaggcaaacagccccaaggacctgttg
tccatggctgaggaactggaaatcgaaaacgcctctaccatgcgaaaaggggagatgatg
ttccagattctccgcgagcgcgcggatgaaggctgggagattgccggcgatggtgtgcta
gaggtgcttcaagacggattcggttttctgcgctcacccgaggctaactatctgccgggt
cctgacgatatctacgtgtccccggacatgatccgacagtattcgttgcgtaccggggat
actgttgaagggcagattaaatctccgctggagaatgaacgctacttcgctctgacaagt
gtcaccaagatcaactttgaagagccagaaaaagcacgccacaagattgcctttgacaac
ctgacgccgctctaccctgatgaacggctgaagatggagatcgaagatcccactatcaag
gatcgctcggcacgggtgattgatctggtatcgccaattggtaagggacaacgttctttg
atcgtggcgccgccacggactggtaaaaccgttatcctgcaaaacatcgctcactcgatc
gcgaaaaatcaccctgaatgctatctgattgttctgctgatcgacgaacgccctgaagag
gtcaccgacatgcagcgctcagtcaagggtgaggttgtatcttctacctttgatgagccg
gcgacacgtcacgttgctgtatccgaaatggttatcgaaaaagccaaacgtctggtcgaa
cataaacgagatgttgttattcttctggattccatcacaagacttggtagggccttcaac
actgtcgtgccttcgtctggtaaggttctgaccggtggtgtggacgcaaatgctttgcaa
cgccctaagcgtttctttggtgctgcccggaacatcgaagaaggtggttcattgacgatc
atcgcgacggccctgatcgacaccggcagccgtatggacgaagtgatttttgaggaattc
aagggcactggtaactccgaaattgttttggatcggaaaattgcagacaaacgggtcttc
ccagccatcgacattctcaaatcaggtacgcgaaaagaggatcttttggtcgacaaaggt
gatctggcgaaaacctttgtcctgcgtcggatcctaaatccaatgggaaccactgacgcg
attgagtttttgttgtctaagttgaagcaaacaaagacaaattcagagttcttcgactct
atgaatacctaa
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