Phaeobacter porticola: PhaeoP97_03923
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Entry
PhaeoP97_03923 CDS
T04595
Name
(GenBank) Dimethyladenosine transferase (rRNA methylation)
KO
K26273
protein strawberry notch
Organism
php
Phaeobacter porticola
Brite
KEGG Orthology (KO) [BR:
php00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
php03036
]
PhaeoP97_03923
Chromosome and associated proteins [BR:
php03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
PhaeoP97_03923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
APG49273
UniProt:
A0A1L3IB60
LinkDB
All DBs
Position
pP97_c:20861..25243
Genome browser
AA seq
1460 aa
AA seq
DB search
MTHLAHFATERALASVAPIPSPDTSAAILSVAEALQPDLAQGFQIDALRLRLEMERAFGG
SDATGAWDWKLAYEAGEAALVLFLRKFGRALLARAGSPAALLPILAKVSGLLPTHTRRSE
EMERFQQFSTPLPMGLAAMAAAQITARDLVLEPSAGTGLLAILAEIAGGSLVLNELADTR
ADLLRRLFPGRPVTGFDAAQIDDHLDAGLRPSVILMNPPFSAVANVDARTTEATARHLRS
ALARLAPGGRLVAITGAGFAPDAPAWAETFGRPTETAHLVFTGAVSGAAFAKHGTSFETR
ISVFDKCRGGEVGGITADLARPISPDVASLLSLITTHVPPRLALAQVAPAGQGLTSPFPG
NPTRATRAAISTSRITSPTPATNAAPQIEAANLAYTLRDATEDGASTRLSDAIYETFRLQ
AIDIPGATPHPTKLVQSAAMASVAPPKPSYRPKLPAAILRDGLLSDAQLETVIYAGAAHG
AYLAGSWTVDETGDLVSAAPDDAADAVRFRRGFFLGDGTGAGKGRQSAGIVLDNWCQGRR
KALWISKSDKLLEDAQRDWSALGQERLLVTPLSRFAQGRDIPLSEGILFTTYATLRSEER
GAKKSRVDQIVDWLGADFDGVILFDESHAMANAAGSKGERGDVTASQQGRAGLRLQHKLP
NARVVYVSATGATSVHNLAYAQRLGLWGGEDFPFSTRAEFVQAIEAGGVAAMEVLARDLR
SLGLYTARSLSYDGVEYEMLEHALTPEQRGIYDAYALAFGVIHRNLSAALEAANITGESG
GTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLIAAIDADLAAGHAAVIQIVSTGEAL
MERRLSDIPTDEWNDVRVDITPREACLDYLQHSFPVQLYEPFTDSEGNLSSRPVTRDGQP
VECREAVRRRDALIEHLASLPPVPGALDQIVQRFGTDLVAEVTGRSRRIVRKGEGAAARL
VVESRAGSANLAETAAFMDDQKRILIFSDAGGTGRSYHADLGAKNQRLRVHYLLEPGWKA
DAAIQGLGRTNRTNQAQPPLFRPVATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGL
FRPEDNLESPYARDALRQLYRRIYRGDVAGCSLMAFEDATGLSLTDDNGLKDDLPPITTF
LNRLLALTIDMQAVLFSAFEELLDQRIEGAIAAGVYDLGLETLRAESFRVTDARVIYTHP
GSGAETQLLTIAEKRRNTPTSLVDALDWLDDPKARLLVNSRSGRAAVQVPATSLMLDDGT
IEPRLRLIRPTEASTVPARMMEDTHWLEADRAVFAAAWTAELAEVPEFSETTLHIVAGLL
LPIWKQLPQDETRIYRLQTDDGQRIIGRRVSPSWVATTLAADAPQLTAAQVHALVLEGKT
VVRLAEGMELHRSRVMGVNRIELSGFLGAAKDRLKADGFFSEIIAWKLRLFCPADSSGIA
VLDRLLARCPVTGLHARGGC
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgacccatctcgcccattttgcgaccgagcgcgcacttgcgtctgttgcccccatcccc
tcccccgatacttcggctgcgatcttgagcgtggccgaggcgctgcagcctgacctggcg
caaggtttccagatcgacgcgctgcgcctgcgccttgagatggagcgcgcctttggcggc
tctgacgcgaccggcgcctgggactggaagctggcctatgaagcaggcgaggcagcgctg
gtcttgttcctgcggaagtttggccgcgcgctgttggcgcgggcgggctcgcccgcagcg
ctgctgccgatccttgccaaggtgtccggccttttgccgacccatacgcggcggtccgag
gagatggagcggttccagcagttctcgacgccgctgcccatggggctggccgcaatggct
gcagcacagatcaccgcgcgcgatttggtgctggagccatcggctgggacgggccttctg
gcgatcctcgcggaaatcgcgggcggcagcctcgtgctgaacgagcttgccgacacccgc
gctgatctcctccgtcgcctgtttccgggccggcctgtcacgggctttgacgccgcccag
atcgacgatcatctcgacgcggggctgcgcccgagcgtcatcctgatgaacccacccttc
tcggcggtggccaatgtcgacgcccgcaccaccgaggcgacagcccggcatctgcgctcg
gcgctcgcgcgtctggcccccggcgggcggttggtcgccatcaccggtgcgggcttcgcg
cccgatgcgcccgcctgggctgagaccttcgggcgcccgaccgagaccgcgcatctggtc
tttacgggtgcggtgtccggtgccgccttcgccaagcacggcaccagcttcgagacgcgg
atttcggtcttcgacaaatgccgcggtggcgaggtgggcggcatcaccgccgatctggcg
cgcccgatatcgcctgatgtcgccagccttctctcgctgatcactacccatgtccccccg
cgcctcgcgctggcgcaggtcgcaccagccgggcagggcctcacttccccctttccggga
aatcctacccgcgccacgcgcgctgccatcagcacatcgcgcatcacgtcaccaacacca
gccaccaacgccgctccacagatcgaggccgcaaacctcgcctataccctgcgcgatgca
accgaggacggggccagcacgcgcctgtcggatgccatttatgagaccttccggctgcag
gcgatcgacattcccggcgccacaccgcacccgaccaagctggtgcaatcggcggccatg
gcttcggtcgctcctccgaaacccagctaccggcccaagcttccagccgccatcctgcgc
gatggccttctgtccgacgcgcagcttgaaaccgtgatctacgcgggcgcggcgcatggt
gcgtatctcgcggggtcttggactgtcgatgaaaccggcgacttggtctcggccgcgccg
gacgatgccgctgacgccgtccgtttccgccgcggcttcttccttggcgacggcaccggg
gcgggcaagggccgccagtcggccgggattgtgctcgacaattggtgccaaggccggcgc
aaggcgctctggatatcgaagagcgacaagcttctcgaggacgcgcagcgcgactggtct
gcccttggccaggagcggctgctggtcacgccgctgtcgcgttttgcacaaggccgcgac
atcccgctctccgagggcatcctcttcaccacctatgccacgctgcgctccgaggagcgg
ggtgcaaaaaagtcccgcgttgaccagatcgtcgactggctcggggctgatttcgacggg
gtgatcctgttcgatgaaagccatgccatggccaacgccgcaggaagcaagggcgagcgc
ggcgatgttacggcctcgcagcagggcagggcgggtctgcggctgcagcacaagctgccg
aatgcccgcgtggtctatgtttcggccacgggggcaacctcggtgcacaaccttgcctat
gcgcagcgcctcggtctgtggggcggggaagactttccgttttcgacgcgggcggaattt
gtgcaagctatcgaagctggcggcgttgccgcgatggaggtcctggcccgcgatctgcgg
tcgcttggcctctacacggcgcgctcgctgtcctatgacggcgtcgaatacgagatgctg
gaacatgcgctgacgccggagcagcgcggcatctatgatgcatatgcgctcgccttcgga
gtcatacatcggaacctgtccgcggcgctggaagcggccaacattactggcgaatccggc
ggtacgctgaaccgccaggccaagtccgccgcccgctcggctttcgagtccgccaagcaa
cggttcttcggccatctgctgacctcgatgaaaactcccacgctgatcgccgccatcgac
gccgatctcgccgcaggccacgcggccgtcatccagattgtctcgacgggcgaggcgctg
atggagcgccgcctgtcggacatccccacggacgagtggaacgatgtgcgggtggacatc
acgccaagagaggcttgcctggattatctgcagcattcctttccggtgcagctctacgag
cccttcaccgatagcgaaggcaacctctcctcgcggcctgtcacgcgcgacggccagccg
gtggaatgccgcgaggcggtgcgccgccgcgatgcgctgatcgagcatctggcaagcctg
ccgcctgtgcccggcgcgctggaccagatcgtccagcgcttcggcaccgacctggtggcc
gaggtcacgggccgctcgcgccgtatcgtgcggaagggcgagggcgctgcagcccgcctc
gtcgtggaaagccgggcggggtctgccaacctcgcggaaaccgccgccttcatggatgac
cagaagcgcatcctgatcttctcggatgcgggcggcacggggcgcagctatcacgccgat
ctcggggcgaagaaccagcgcctgcgggtccactacctcctggaaccgggctggaaggcc
gatgcggccattcagggactgggccgcaccaaccgcaccaaccaggcgcaaccaccgctg
ttccggcccgtcgcgaccgatgtaaaggcagaaaagcggttcctctcgaccatcgcgcgt
cgcctcgacacgcttggtgcgataacgcgcggccagcgccagaccggcgggcagggtctg
ttccggccggaggacaatctggagtccccctatgcccgcgatgccctgcgccagctttac
cgccgcatctatcgcggcgatgtggcgggttgctcgctgatggcgtttgaggatgcgacc
ggcctcagcctgactgatgacaacggtctgaaggatgacctgccgccgatcacgaccttc
ctcaatcgcctgctggcgctgacgatcgacatgcaggccgtgctcttctcggccttcgag
gaactcctcgatcagcggatcgaaggggccatcgccgctggggtctatgaccttggtctc
gagacgctacgtgccgagagcttccgcgtcacggatgcgcgggtgatctacacgcatccc
ggctccggcgcggaaacccagctcctcaccatcgcggagaagcggcgcaacacgccgacc
tcccttgtcgatgcactcgactggctcgacgacccgaaggcgcggcttctggtcaacagc
cgctcgggccgggcggcggtgcaggtgccagccaccagccttatgctggatgacggcacc
atcgaaccgcggctgaggctgatccggccaacggaggccagcacggttccggcccggatg
atggaggacacccactggctcgaagccgaccgcgcagtcttcgccgccgcctggaccgcg
gaactggccgaggtgccggagttctcggaaaccaccctgcatatcgtggcgggcctcttg
ctgccgatctggaagcagctcccccaggatgaaacccgcatctaccggctgcaaaccgac
gatgggcagcgcatcatcggtcgccgcgtctcgccgtcttgggtcgcgaccacgctggcc
gctgacgcgccgcagctgacagccgcacaggttcatgccctcgttctggagggcaagacc
gtggtgcggctggccgaggggatggagttgcacaggtcccgcgtcatgggggtgaaccgg
atagaactgtcgggctttttgggtgccgccaaggaccggctcaaggcagatgggttcttc
tcggagatcatcgcctggaagctgcggctcttctgcccagcagactccagcggcatcgca
gtacttgatcgtctgcttgcacgttgtcccgtgacaggactacatgcgcgtggagggtgc
tga
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