Phaeobacter porticola: PhaeoP97_04073
Help
Entry
PhaeoP97_04073 CDS
T04595
Name
(GenBank) Hemolysin-type calcium-binding protein repeat protein (2 copies)
Organism
php
Phaeobacter porticola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
HemolysinCabind
MlaD
Pam3_Gp34
WS_DGAT_C
Motif
Other DBs
NCBI-ProteinID:
APG49423
UniProt:
A0A1L3IBJ4
LinkDB
All DBs
Position
pP97_e:39719..44896
Genome browser
AA seq
1725 aa
AA seq
DB search
MIDIQVFVFDPSVEQYQTLLQDLPEQAKIVLLDSDKPGLAQIADALRDMSGLSALHVVSH
GDEGKLFIGNEVVTKSVITDNPEVMEVLGEALYPTGDILLYGCKVAATAQGEAFVTALAK
ATGANVAASQTLTGAAELGGDWTLGLQRGAVTTPVGVSATAQAQFSGVLSTVIDYSAYSN
GGDNKADWADGSDGIADFPGITVTLDYGDGTEGANTFTNLNIRGAMNMAVGAVLGGNVGN
TDGTFFNNDSNGFQLSGDGDFSFEGFTVIGRANSLSGDTFTIRGFNSSGTEVVTDSLDWG
ASGANVTATYNIGSGSWDSDAAWASVRTVVVDYSNDPDFQEFAVVSITVDAATPSNVVPA
LGGTPADDTATEDVATAIDLSAYNVSDADGDIITLTLAVDRGTIASTDGNGVTGGVTVAN
SGTGSMTLQGSAATLNTYLNDTTKIEFTTSSNDTTTATLTVTPSDGSATGTADTISINVT
SVNDAPTLVATGDNPTYVEGATASGLFNTVTASTVEIGEVFTGLTLTVTNVSDGAAEVLN
FDGSQVTLTHGFSATTATNGLSVTVSLSGTTATVSFSGASLSAAGLQTLVDGLSYENTSD
DPTTSANRVVTLTETTDSGGTANGGDDSATLSLTSTVSITAVNDAPGLSNLSGDNATLLP
GTVEDIDAGGNTTLTNADSGDYDGGFLLITDNGGNNTASGDFSVDGTTVTSDADATIAAG
EIIAVNGVSIGTVHATDDGQGGNDLRIDFGANATNATIQSLIQNLSWGAAAGSGQQTFTI
TLNDNDGTANGGDQDVSVDFSMSIGNKPVIANLSGDTVAFVENGGNVALDTNADITVSDA
DGGNFNSGSLTVAFQSGQTAHDRIVIDTSANVALSAGQTAGSTVTVQGVMIGTLVAGSTG
GASENLVVDLNANATPVRVQALITELSYSNTSDEPNTANRTLGVTIVDDVGITSDTATVT
VTVAATDDAPTLTATGTDPNFIEGGAAMDLFQTVSADTIETGQTFTELRLTITNLADGSA
EILNIDGSALALTDANTLTTATNSLSATVSVTGTTATVTLTSGTMSSAAVQTLVDAITYE
NTSEDPTNAPNRVVTITGLTDSGSATGSNENSATLSLASTVTVSPVNDAPVVDAVFAEAA
SQIVLGTGFADLSGLNDAAVSNLDSDDYQGGSLTIQQTSGTANGSWGVDGTLVTSDGDAV
IAAGQTVQVNGVTVGTIDSTDVGANGGTLTINFTTGSATSANVQTLLQNLTYSAPSASGT
RTFGLTLNDNDGITNGGDQDVSGTFDILVVSSPPVIGNLDGDSFTFTEGDNATPIDVGGN
LTVSDPDDANFDQGTVTISYENGMQPEDRISVDVSGVVSLSAGLGNGSVVSVSGVTIGTV
SATGTGGAGEDLVINLTAGATHAAMQSFLSTVQYDNTSGGAPTDGNREIGVRIVGGDGAI
SDLAVITINVDPASSGGGSSGGTPAPVETPMDVSAGDDNDTFSGTNYNDTINGGGGNDRI
TGDRGEDLLHGGKGVDTLRGGDGDDRLFLGLGNDRGVAGAGNDQLNGGGGNDMLHGGQGD
DTLRGGQGADRVYGGQGSDSVRAGQGNDTVFAGSGADRVRGDLGNDQISLGTDDDRAFGG
SGDDSLAGGNGADTLNGGMGDDLLRGGAGRDTFIFAGGRGNDRIADFNVQDDQLNLRDFG
FTDREQALAFGMQSDGDFIFSFEDGSTLTLHNISLADLNEAVFLF
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgattgatattcaagtctttgtttttgacccttccgtagaacagtaccagacattgctg
caagacttgcccgagcaagcgaaaattgtcctgctggacagcgataaacccggtctggcc
caaatcgcggatgctctacgcgatatgagtggcctgtctgccctgcatgttgtctcacat
ggtgacgagggcaaactgtttattgggaatgaggttgtcacaaaaagcgtcattacagat
aatcccgaggtgatggaggtgctgggcgaagcgctctatccaactggcgacatccttctc
tatggctgcaaggtcgctgcgacagcgcagggcgaggcctttgtcaccgctctggcaaag
gcgaccggcgccaatgtggccgcgtcgcagacgttgacgggggcggcggaactgggcggc
gactggacgcttggcctgcaacgaggtgccgtgacgacaccagttggtgtgtcggcgaca
gcgcaggcccagttttccggggttctgtccacagttattgactatagcgcctactctaac
ggtggggacaacaaggcagattgggccgacggcagcgatggtatagcggattttcccggc
atcacggtgaccctggactatggagatgggaccgaaggggcaaataccttcaccaatttg
aatattcgcggcgcgatgaacatggcggtaggtgccgtgctcggtggcaatgttggtaat
acagacggcaccttcttcaacaatgatagcaatggtttccaattgtctggagacggcgac
ttcagctttgagggttttacggtaataggccgtgctaacagcctcagcggtgacacgttt
acgatccgcgggttcaacagttccggaactgaggttgtcacagacagtctcgattgggga
gccagcggagcgaatgtcacggcaacttacaatatcgggtccggaagctgggatagcgat
gctgcatgggcatccgtccgaaccgtggtcgttgactattccaatgaccccgattttcag
gaatttgcagttgtgagcatcactgtcgatgccgccacgccatcgaatgttgtgcctgca
ctcggcgggacaccggcagatgatacagcgaccgaggatgtcgcaacggcgattgatctc
tctgcctataatgtatcggacgcggatggcgatatcattactctgaccctggctgtagat
cgcggtacgattgcctctaccgatggcaatggggtcactgggggcgtgacggttgcaaat
tccggcaccggttcgatgacccttcagggcagcgccgcgaccctgaacacctatctgaat
gacacgaccaaaattgaattcaccaccagcagcaacgacacgaccaccgcgacgttgact
gttacgcccagtgatggaagcgctaccggcactgcagacaccatcagcatcaatgtgact
tcggtcaatgacgcaccgacactggtcgcaaccggcgataaccccacatatgtagaaggc
gctacagcgtccggtctgttcaacacggtgaccgccagcactgtcgagattggcgaagtg
ttcaccggattgaccctcaccgttaccaacgtcagcgatggcgcggctgaggtgctgaat
ttcgacggctctcaggtgacactgacgcatgggttctctgccaccaccgcgaccaatggg
ttgagcgtgacagtctctctcagcggcaccaccgcgactgtcagcttctctggcgcgtct
ctttcagcggcgggtttgcagacattggtggatggcctctcctatgagaatacctctgac
gatccgacgactagcgccaaccgagttgtcacgctcaccgagacgacagacagcggcggc
accgcaaatggcggcgacgattctgcgacgctgtccttaacaagcacagtttccatcacc
gctgtaaacgacgcgccgggtctgagcaatctgagcggtgacaatgccacgctgctaccg
ggcaccgtcgaagatatcgacgcaggcgggaatacaaccctgacgaatgcggactcaggt
gattatgacggtggcttcctgctgatcaccgataacgggggcaacaatacagccagcggc
gatttctctgtggatggtacaactgttacatcggacgcggacgccacaattgcagccggt
gaaatcatcgcggtcaacggcgtgagcattggtacggttcacgcgactgacgacggccaa
ggcggcaatgatctcaggatagattttggggccaatgccaccaacgccaccatccagtcc
ttgatccagaacctgagttggggcgctgccgcgggatccggtcagcagacctttaccata
acattgaacgacaacgacggcaccgccaatggcggcgatcaggatgtctccgtcgacttt
tcaatgtccattggcaacaaacctgtgatcgccaatctttctggtgacactgttgcattc
gttgaaaacggtggcaatgttgccttggatacaaacgcagacatcactgtcagtgatgca
gatggcggcaatttcaacagcggttcgttgaccgtcgcgtttcagagcgggcaaaccgcc
catgatcgcattgtcattgacaccagcgcaaatgttgcgctgtctgccggacagactgct
ggttcaacggtgacggtgcagggggtgatgatcggaacgctcgttgcagggtcaacaggt
ggcgcgagtgaaaaccttgtggtcgaccttaacgccaacgcgaccccagtacgggtacag
gccctcataaccgagctgtcatatagcaacaccagcgatgaaccaaatacagcaaaccga
acgctgggtgtcacaatcgtggatgatgttggcatcacttcagatacggcgaccgtgacc
gtaaccgtcgccgcgacggatgatgcacccacgttgaccgcaaccggcaccgatccgaat
tttatcgaaggcggcgctgctatggatctgttccagacagtcagcgccgatacgatagag
accgggcaaacctttaccgagctgcgtttgaccatcaccaacttggccgatggcagcgcg
gaaatcctgaacattgatggcagtgcgcttgcgttgaccgatgccaacacgctcaccact
gcaacaaatagcctatcagccacagtttcggtcactggcacaaccgccaccgtcacgctg
acaagcggcacgatgagctcggcagccgttcaaaccttggtggacgctatcacctatgag
aacacgtcagaggatccgaccaatgcccctaaccgtgtggtcacaatcacaggcttgacc
gacagtggcagtgcaacgggcagcaatgagaacagtgccacgctgtcactggcgtcgact
gtaacggtgagcccggtgaatgacgcacccgtggtggacgcggtgtttgccgaggccgcc
agccagattgttctcgggacgggttttgcagacctcagcgggctcaatgatgccgcggtc
tcgaacctcgattcggatgactaccaagggggttctctgaccatccaacagacctcggga
actgcaaatgggtcctggggcgtggatggtacgcttgtcacatcagatggggatgcagtc
attgccgcagggcagactgtgcaggtcaatggggtgacggttgggaccattgactccacc
gatgtcggtgccaatggtggaacgctcacaattaatttcacaaccggaagtgcgaccagc
gccaacgtgcaaacgcttctgcagaatctcacctattctgcaccctccgcaagcggaacg
cggacctttggtctgacattaaatgataatgatggtatcacaaacggcggcgatcaggat
gtttctggcacgttcgatatccttgttgtcagcagtcctccggtcatcggaaacttggac
ggcgacagttttacgtttaccgaaggcgataatgcgacccccattgatgtgggtggtaat
ctgaccgtcagcgacccggacgatgcaaattttgatcaggggaccgtgacgatttcctac
gaaaacggcatgcagcccgaagaccgtatctcggtggatgtcagcggcgtcgtttcccta
tccgcaggtctgggcaatgggtctgtcgtatcggtaagcggcgtaaccatcggaactgtt
tcggccaccggaactggcggcgcgggagaggatctggtgatcaaccttaccgcaggcgca
acccatgcggcgatgcaaagctttctcagtaccgttcaatatgacaacacatctggcggc
gcaccgacagatggaaaccgggagatcggtgtcaggatcgttggcggtgatggtgcaata
tctgatttggccgtgattacgatcaatgtagatcccgcgtcctcaggtggtggatcgtca
ggcggaacgccagctcctgttgaaacaccgatggatgtgtcggcaggtgatgacaatgac
accttcagtggcaccaactacaatgacaccatcaacggcggcggtggaaatgaccgcatt
accggggatcgaggcgaagatctcctccatggtggcaagggcgttgatacattgcgcggt
ggtgacggtgacgatcggctgttcctcggtttaggcaacgaccgcggtgttgcgggcgcg
gggaatgatcagctgaacggtggcggcgggaatgacatgctgcatggcgggcaaggcgat
gatacgctgcgcggtggccaaggcgcggaccgtgtctatggcggccagggctccgatagt
gtccgtgccgggcagggtaacgatacggtctttgccggttctggtgccgatcgtgtccgc
ggtgacctcgggaacgaccagatctccctcggtaccgatgatgacagggccttcggcggc
agcggcgatgatagcctcgctggtggcaacggcgcggacacattgaacggcggcatgggc
gatgatctgttacgcggaggcgcgggtcgtgatacgtttatttttgccggcgggcgcggc
aacgaccgaattgcagatttcaatgtgcaagatgatcagcttaatctcagggatttcggc
ttcactgaccgtgagcaggcgcttgcctttggcatgcaatcagacggcgatttcatcttc
agttttgaggatggcagcacgctaaccctccacaatatatcgctggcggatctgaatgag
gctgtgttcctattttag
DBGET
integrated database retrieval system
