Phaeobacter sp. LSS9: D1820_00290
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Entry
D1820_00290 CDS
T05617
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq02020
Two-component system
phq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1820_00290
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
D1820_00290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
phq02035
]
D1820_00290
Bacterial motility proteins [BR:
phq02035
]
Flagellar system
Chemotaxis proteins
MCPs
D1820_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
HAMP_2
ClpB_D2-small
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
AXT33530
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Position
53668..55602
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AA seq
644 aa
AA seq
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MPSIFFRLPIRIYAVVAMALALSVLLTVLLLSRAVDNAYAMRDRELHNIIDTSISLLADL
EARVQSGDLTADEARAQGREVIEKIRFETSGYLFAFDQDLVVRAHPMVPDWVGTDRSGFE
DVKGMKVFQELGKVAASDGAGSVRYWFQKPGQTTPEQKIGYVQAFEPWGWIIGTGSYVSD
IQADLAQMRIESMITLGVSLVLLMIASTVLLRSVTGPINGLKARMASMAEGETHADVPYT
QARSEIGEMARTLEAFREKLEQQEEMKGHQQARDAERADVVQVISSRLATLSQGDLTVRI
NENLPEDYAQLQRDFNRTAETLGSTVTQVIDTAESIRSGANEISQASDDLSNRTESQAAT
LEETAAALDEMTASVKSAAEGARSVESIMQEAKQEAETSGEVVQSAVSAMTEIEQSSSHI
SQIISVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVASEVRALAQRSSDAAMEIKTLI
GDSTKQVERGVDLVGKTGDALQGIVERVSHISQLVSGIATGASEQSTGLHEINTGVTQLD
QVTQQNAAMVEEATAAGHMLNADASKLAELVAHFRVAAGGGQAPARKPAAATAPTRRAVA
TQEATPAAPSAHGDDWDLEAVTPQPAPAAASTSGNAAKDIWQDF
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccatattctttcgtcttcccatccgtatctacgcagtggtggcgatggcgctc
gcactttccgtgctgttgaccgtcctgctgttgtcgcgtgctgttgataacgcctatgcg
atgcgcgaccgtgagctgcacaacatcatcgacacctcgatcagcctgctcgccgatctt
gaggcgcgagtgcagtcaggtgatctcaccgccgatgaggcgcgcgcccaggggcgtgaa
gtgattgaaaaaatccgtttcgagacgtccgggtatctctttgccttcgaccaggacttg
gttgtgcgggcgcatccgatggtgcccgattgggtgggcaccgaccggtccggtttcgaa
gacgtgaagggcatgaaggttttccaggaacttggcaaggttgccgccagtgacggtgct
ggatctgtccgctattggttccagaaaccagggcagaccacgccagaacagaaaatcggc
tatgtgcaggcgtttgagccctggggctggatcatcggcacgggatcttatgtgtctgac
atccaggcggacctcgcgcagatgcggatcgaatcgatgatcacccttggcgtgagcctg
gttctgctgatgattgcttcgaccgtcctgttgcgcagtgttacggggccgatcaatggg
ctgaaggcgcggatggcctccatggcagagggcgaaacccatgcggatgttccctacacg
caggcccgcagcgaaatcggcgaaatggcccgcacgctggaagcgttccgcgagaaactg
gagcagcaggaggagatgaaaggccatcaacaggcccgcgatgcggagcgtgctgatgtg
gtgcaggttatctccagtcgcctggcgacgctgtcacagggggacctgaccgttcgcatc
aatgaaaacctgccggaggattacgcccagctgcagcgtgatttcaaccgcacggcggaa
accttgggctccacggtcacccaggtgattgacacagccgagagcattcgcagtggcgca
aatgaaatcagccaggcctctgacgatctgtccaaccgcaccgaaagccaggccgccacg
ctggaggaaaccgccgccgctctggatgagatgacggccagcgtgaaatccgccgccgaa
ggcgcgcgcagcgtcgaaagcatcatgcaggaggccaaacaggaggccgaaaccagcggc
gaagtggtccagagcgcagtttctgccatgaccgagatcgaacaatcctcaagccatatc
tcgcagatcatcagtgtgattgatgacatcgcctttcagaccaacctcctggcgctcaac
gccggggtggaagccgcacgtgccggcgaggcgggcaagggctttgccgtggtcgccagc
gaagtgcgggccctggcgcagcgctcctcggatgccgcgatggaaatcaagaccctgatt
ggcgacagcaccaaacaggtggagcgtggcgtggatctggttggcaaaaccggcgatgcg
cttcagggcattgtcgagcgggtcagccatatctcgcaactggtgtccggcattgcgacc
ggggccagcgaacagtccactggcctgcatgagatcaacactggcgtgacccagctggat
caggtcacccagcagaatgccgccatggttgaagaggccaccgccgccggtcacatgttg
aacgctgatgccagcaagctggcggaactggtcgcccatttccgtgtcgcagcaggcggc
gggcaggccccggcccgtaaacccgcagcggccacagcgccaacccggagagcggttgcc
acgcaggaggccacaccggccgcccccagcgcccatggcgatgattgggaccttgaggct
gtcacaccacagccagcgcccgcagcagccagcaccagcggcaatgccgccaaggacatc
tggcaggatttctga
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