Phaeobacter sp. LSS9: D1820_00325
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Entry
D1820_00325 CDS
T05617
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00730
Thiamine metabolism
phq01100
Metabolic pathways
phq01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D1820_00325 (thiC)
Enzymes [BR:
phq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D1820_00325 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AXT33537
LinkDB
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Position
complement(60149..61957)
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AA seq
602 aa
AA seq
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MNVPNPKITTGALPASRKIYVSGEVHPDIRVPMREIATHPTAGEAPLPVYDSSGPYTDPD
VLTDIREGLPQMRRQWIEARGDVESYQGRDVKPEDNGFVEGDRLTPEFPVKPAPLRGKDG
TAPTQLAYARAGIITPEMEYVAIRENQLRDLSPCHRDGHDWGANIPDYVTPEFVRSEIAA
GRAIIPANINHPEIEPMIIGRNFLVKINANMGTSAVTSSMEEEVDKLVWAIRWGADTVMD
LSTGRNIHNTREWIVRNSPVPIGTVPIYQALEKVNGIAEDLTWEVFRDTLIEQAEQGVDY
FTIHAGVRLHMVPMTVERVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDICRQYDVS
FSLGDGLRPGSIADANDEAQFAELETLGELTKIAWAKDCQVMIEGPGHVAMHKIKENMDK
QLECCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDD
VKTGVITYKIAAHAADLAKGLPGAQRRDDALSRARFEFRWEDQFNLSLDPDTAREFHDQT
LPKQAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGMEAMAAKFREGGELYVPAPEAAEP
AE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccccaacccgaaaatcaccacgggcgcattgcctgcatcgcgcaagatctat
gtcagcggcgaagtccacccggacatccgcgtgcccatgcgcgaaatcgccacccacccc
accgcaggcgaggcgccgctgccggtctatgacagctctggcccctataccgacccggat
gtgctgaccgatattcgcgaaggtctgccacaaatgcgccgtcagtggatcgaagcccgc
ggcgacgtcgaaagctatcaaggccgcgatgtgaagccggaggacaacgggtttgtcgag
ggcgaccggctgacgccggaattcccggtgaagcccgcccccttgcgcggcaaggacggc
acagcgccgacccagctggcctatgcgcgcgccggcatcatcacgccggagatggaatat
gttgcgatccgcgaaaatcagctgcgcgacctgtccccctgtcaccgcgacggccatgac
tggggcgccaatatccccgactatgtgacgccggagtttgtccggtccgaaatcgcggca
ggccgcgccatcatccccgccaacatcaaccaccccgaaattgaaccaatgatcatcggt
cgcaattttctggtgaagatcaacgccaatatgggcacctccgcggtcacctcctcgatg
gaggaggaagtggacaaactggtctgggcgatccgctggggcgccgacacggtgatggat
ctgtcgacggggcgcaacatccacaacacccgcgaatggatcgtgcgcaattcccccgtc
ccgatcggcaccgtgccgatctatcaggcgctggagaaggtgaacggcatcgctgaggac
ctgacctgggaggtattccgcgacacgctgatcgaacaggcggaacagggcgtggattac
ttcacgatccatgccggcgtgcggctgcatatggtgccgatgacggtggagcgggtgacc
gggatcgtgtcacgcggcggctcgatcatggccaagtggtgcctgcatcaccacaaggag
agcttcctctatgaacatttcgaggagatctgcgacatctgccgccagtatgatgtttcg
ttctccttgggcgacgggctgcgccccggctcgattgcggacgccaatgacgaggcgcag
tttgccgagttggaaaccctgggcgagttgaccaagatcgcctgggccaaggattgccag
gtgatgatcgaagggccgggccatgtcgccatgcacaagatcaaggagaacatggacaag
cagttggagtgctgccacgaggcgccgttctatacgctggggccgctgaccactgacatt
gcgccgggctatgaccacatcaccagcggtatcggggcggcgatgatcggctggttcggc
tgtgccatgctctgctacgtgacgcccaaggaacatctcggcctgccggatcgcgacgac
gtgaaaacaggcgtgatcacctataagatcgccgcccatgcggccgacctcgccaagggt
ctgccgggggcgcagcgccgtgacgacgccctcagccgcgcgcggttcgagttccgctgg
gaggatcagttcaacctctcgctggatccggatactgcgcgcgagttccacgaccagacc
ctgcccaagcaggcgcataaggtggcgcatttctgctccatgtgcggtccgaagttctgc
tcaatgcggatcagccacgacatccgcgccgaggcgcagaaggaaggcatggaggcgatg
gccgccaagtttcgcgaaggcggcgaactctatgtgccagcgcccgaggctgcggaaccg
gcggaatga
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