Phaeobacter sp. LSS9: D1820_01290
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Entry
D1820_01290 CDS
T05617
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1820_01290 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_01290 (xth)
Enzymes [BR:
phq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
D1820_01290 (xth)
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
D1820_01290 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
A6_N
Motif
Other DBs
NCBI-ProteinID:
AXT33711
LinkDB
All DBs
Position
complement(268023..268829)
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AA seq
268 aa
AA seq
DB search
MKIATFNINGIKARINALPDWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK
SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEATVVGKQAIRICGLYLPNGNPVELDAE
GQPVEGGKYAYKLAWMERLRLRAQDLLAEEMPALMAGDYNIIPQAEDAKTPEAWKDDALH
RPESRAAFQRIMALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAADL
LRDCQIDKDVRGRDKPSDHVPVWVDLDL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccaccttcaacatcaatggtatcaaggcccgtatcaacgcgttgccggac
tggctggatgaggcgcagcccgatgtggtggtgctgcaggagatcaaatccgtcgatgaa
gccttcccgcgcgagctgttcgaggaccggggttacaacgtcgaaactcacggtcagaag
agctttaacggggtggcgatcctgtcgaaactgccgctggaggatgtgcggcgcgggctg
cccggtgatgacagcgacgaacaggcgcgctggatcgaggcgacggtggtgggcaaacag
gcgatccgcatctgcgggctgtacctgcccaatggcaacccggtagagctggacgcggag
ggccagccggtcgagggcggcaaatacgcctataaactggcctggatggagcggctgcgg
ctgcgcgcgcaggatctgctggccgaggaaatgcccgcgctgatggccggggattacaac
atcatcccacaggccgaagatgccaagaccccggaggcctggaaagacgatgcgctacac
cgccccgaaagccgggcggcgtttcagcggatcatggcgctcggttttaccgaggcgttc
cgcgcgcgccatcaggggccggggcattattcgttctgggactatcaggccggcgcctgg
aaccgcaacaatggcatccgcatcgaccatttcctgttgagcccgcaggccgccgacctg
ctgcgtgactgtcagatcgacaaggatgtgcgcggccgtgacaagccatcagatcatgtg
ccggtctgggtcgatctggatctgtga
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