Phaeobacter sp. LSS9: D1820_01965
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Entry
D1820_01965 CDS
T05617
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00260
Glycine, serine and threonine metabolism
phq00460
Cyanoamino acid metabolism
phq00630
Glyoxylate and dicarboxylate metabolism
phq00670
One carbon pool by folate
phq00680
Methane metabolism
phq01100
Metabolic pathways
phq01110
Biosynthesis of secondary metabolites
phq01120
Microbial metabolism in diverse environments
phq01200
Carbon metabolism
phq01230
Biosynthesis of amino acids
phq01240
Biosynthesis of cofactors
phq04981
Folate transport and metabolism
Module
phq_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D1820_01965
09102 Energy metabolism
00680 Methane metabolism
D1820_01965
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D1820_01965
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D1820_01965
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D1820_01965
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D1820_01965
Enzymes [BR:
phq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D1820_01965
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AXT33833
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Position
complement(395676..396974)
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AA seq
432 aa
AA seq
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MTETTSRDPGFFTQSLAERDPELFGSVTDELGRQRDEIELIASENIVSAAVMEAQGTVLT
NKYAEGYPGRRYYGGCQYVDVAENLAIDRAKQLFGCEFANVQPNSGSQANQGVFQALIKP
GDTILGMDLASGGHLTHGARPNQSGKWFNAVHYGVREEDCLIDYDQVEALAVEHQPKLII
AGGSAIPRVIDFARFREIADKVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTL
RGPRGGMILTNDADIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKDYQKQVRA
NAVALADQLIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDP
EKPTVTSGIRLGTPAGTTRGFEEAEFREIADLIIEVVDGLAANGEDGNAAVEASVREKVA
ALCARFPLYPNH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccacttcccgcgaccccggttttttcacccaatccctcgccgagcgcgat
ccggagctgttcggctcagtcacggatgaacttggccgtcagcgcgacgagatcgaactg
atcgcgtcggaaaacatcgtctccgccgccgtgatggaggcgcagggcaccgtcctgacc
aacaaatacgccgagggctacccgggtcgtcgctactatggcggctgccaatacgttgat
gttgcagagaaccttgccatcgaccgcgccaagcaactgttcgggtgtgaattcgcaaac
gtgcagcccaactccggttcgcaggcgaaccagggtgtgttccaggcgctgatcaaaccc
ggcgacaccatccttggtatggatctggcctccggcggccacctcacccacggcgcgcgc
cccaaccagtccggcaaatggttcaacgccgttcactacggtgtgcgcgaagaagactgc
ctgattgactacgaccaggttgaggccctcgcagttgagcatcagcccaagctgatcatc
gccggtggttccgccatcccgcgcgtcatcgactttgcccgcttccgcgagatcgctgat
aaggttggcgcctacctgcatgtcgacatggcgcatttcgccggtctggtcgccgcgggt
gagcacccctcccccttcccgcatgcccatgttgccaccaccaccacgcataaaaccctg
cgcggcccgcgcggtggcatgatcctgaccaacgatgccgatatcgcaaagaaggtgaac
tccgcgatcttccccggtatccagggtggcccgctgatgcatgtgatcgccgccaaggct
gtcgccttcggggaagcactgcgtccggagttcaaagactaccagaagcaggtgcgcgcc
aatgccgtggccctcgcggatcagctgatcaagggcggtctggatatcgtcaccggtggc
accgacacccatgtcatgctggtcgacctgcgccccaaaggcgtgaccggcaacatcgtg
gacaaggctctgggccgcgcccatatcaccaccaacaagaatggcatcccgttcgacccg
gaaaagccgactgtgacctcgggcatccgtcttggcaccccggcgggcaccacccgtggc
tttgaagaagcagaattccgcgagatcgcggatctgatcatcgaagttgtcgacggtctg
gccgccaatggcgaagatggcaacgctgcggtcgaggcttcggtacgtgagaaagtggcc
gccctctgcgcccgcttcccgctctacccgaaccactaa
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