Phaeobacter sp. LSS9: D1820_02955
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Entry
D1820_02955 CDS
T05617
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_02955
Enzymes [BR:
phq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D1820_02955
DNA repair and recombination proteins [BR:
phq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D1820_02955
Prokaryotic type
D1820_02955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXT34015
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All DBs
Position
590466..591905
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AA seq
479 aa
AA seq
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MTDEKPSNAPIIWWVRRDLRLADNPALAAAVAADVPVIPVFIFDTLDEDLGAAPRFRLGL
GLAHLAKELERRGARLILRRGPAQEVLTQLITETSAGAVHWTRAYDPQAIARDTDIKDQL
KGQGIAAKSFGGHLLFEPWTVETKTGGMYRVYSPYWKAVRDRDVDGLIAAPSRIPAPAHW
PASDDLDSWQLAAAMRRGADVVAQYCRVGEDAAQARLAEFLDTRVADYKQDRDFPAVDAT
SGLSENLAWGEISPRRMWHHGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTPHILTRNW
RPEWEHFNWSERDDDKVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVASFLTKHML
THWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKFDAKGRYQS
AWIAEGQANPPQTALDFYHATPFSWGLSPQDRRASPFVDLKEGRARALEAYGQRELPED
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgagaaaccgagcaacgccccgatcatctggtgggtgcggcgcgacctgcgt
cttgccgataaccctgcgctggcggcagctgttgctgccgatgttccggttatccctgtc
tttatctttgatacgctggacgaggatctgggggccgcgccacggttccggctggggttg
gggctggcgcatctggccaaggaattggagcggcgcggcgcgcggctgatcctgcgtcga
gggcccgcgcaggaggtgctgacacagctgatcacagaaaccagtgcgggcgcggtccac
tggacccgcgcctatgacccgcaggccatcgcccgcgacaccgacatcaaggaccagctg
aaggggcagggaattgcggcgaaatcctttggcggccatctgctgtttgagccctggacg
gtcgagaccaaaaccggcggcatgtaccgggtctattcgccctattggaaggctgtgcgc
gaccgcgacgttgacgggctgatcgccgccccctcacggatcccggcgccggcgcattgg
ccggcctcagatgatctcgacagctggcagctggctgccgccatgcgccgtggcgcagat
gtggtggcgcaatactgccgcgttggggaagatgccgcgcaggcgcggctggcagagttc
ctcgacacccgcgtcgccgactacaaacaggatcgcgactttccggctgtggatgccacc
tcaggcctgtctgaaaacctcgcctggggagaaatcagcccgcgccgcatgtggcatcac
gggttggaggcgcgccgggccggtaaatccggcgctgagcattttctcaaggaaatcgtc
tggcgcgaatttgcctatcacctgatgttccacaccccccatattctgacccgcaactgg
cgtccggaatgggagcatttcaactggtcggagcgtgacgatgacaaggtcgacgcctgg
cggcgcggccagacagggtataatttcgtcgatgccgccatgcgcgaactctatgtgacc
ggcaagatgcacaaccgcgcccggatgatcgtggccagctttctgaccaaacatatgctt
acccattggcgcatcggtcagcagtggtttgaggagtgtctggtggactgggacccggcc
tccaacgccatgggctggcaatgggtggcaggctccggccctgatgcctcgccgttcttt
cggattttcaaccccgatggtcagctggagaaattcgacgccaaaggtcgctaccaatcc
gcctggatcgccgaagggcaggccaatccgccgcagacggcgttggatttctaccacgcg
acacccttctcctgggggctgtcgcctcaggacagacgcgccagccccttcgttgatctg
aaggaggggcgcgcccgcgcgctggaggcttacggccagcgggaactgcccgaggactga
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