Phaeobacter sp. LSS9: D1820_04420
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Entry
D1820_04420 CDS
T05617
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1820_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_04420
Enzymes [BR:
phq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D1820_04420
DNA repair and recombination proteins [BR:
phq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1820_04420
Prokaryotic type
D1820_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXT34278
LinkDB
All DBs
Position
916586..917239
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AA seq
217 aa
AA seq
DB search
MNAGLSDLGGWSKLPFFADRYPAIAAAVAEDPRDILPPAGQRLAALTLTPPEETRVVILG
QDPYPTPGHAHGLAFSVEPDVRPLPRSLNNIFKELHDDLGIERETGDLRGWARQGVLLLN
TVLSVPAGEANGHKTLGWQQLAHEVLSLSSQRPTAYILWGKQAQGLEKYIQPGDHLILRT
AHPSPLSARRGFFGSRPFSTVNRWLAEQGQPTIDWNA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaggcctgtcggatctgggcggttggtccaagctgccgttttttgctgaccgc
tacccggccattgctgcggcggtggctgaggatccgcgcgatatcctcccgccagcgggt
cagcgccttgcggctctcacgctgaccccgccggaagaaacccgcgtggtcattctgggt
caggacccctatccgacgcccggtcatgcccatgggttggcgttttcggtcgaacccgat
gtgcgcccgctgccaagatctttgaacaatatattcaaagagttgcacgacgatcttggc
attgagcgcgagacaggcgacctgcgcggctgggcacgtcagggcgttttgctgctcaac
accgtcttgtccgtccccgctggcgaggccaacggccacaaaacccttggctggcagcag
ctcgcccatgaggtcctcagcctgtccagccagcgtcccacggcttatattctctggggg
aaacaggcccaagggcttgaaaaatatatccaaccgggtgatcaccttatcctgaggacc
gcgcacccctcaccactgtctgcgcggcgtggctttttcggctcgcgccccttttcgacg
gtgaaccgctggcttgctgagcagggccagccgacaattgactggaacgcgtga
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