Phaeobacter sp. LSS9: D1820_07595
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Entry
D1820_07595 CDS
T05617
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00630
Glyoxylate and dicarboxylate metabolism
phq00680
Methane metabolism
phq01100
Metabolic pathways
phq01120
Microbial metabolism in diverse environments
phq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D1820_07595
09102 Energy metabolism
00680 Methane metabolism
D1820_07595
Enzymes [BR:
phq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
D1820_07595
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4
Fer4_21
Fer4_10
Fer4_Nqo3
Fer4_9
Fer2
Fer4_16
Fer4_17
Fer4_6
Fer4_4
Fer4_2
Fer4_15
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AXT34841
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Position
complement(1590794..1593568)
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AA seq
924 aa
AA seq
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MSDKITFTLDGEQVTADAGLTIWEVANGRGLKIPHLCHKPQPGYRPDGNCRACMVEIEGE
RTLAASCIREPAEGMVVTTNNARAEGARKMVMELLVADQPKQEEARDKSSHLWDMAELNG
VSESRFPKLEKDRIPLLDDSHVAMKVNLDACISCNLCVRACREVQVNDVIGMAGRGHDAY
PVFDIADPMGASSCVACGECVQACPTGALMPATVMDDNQVGDSKDYDSETESVCPFCGVG
CKVSLKVKDGKVKHVEGINGPANEGRLCVKGRFGFDYIHHPHRLTKPLIRRDDAPAKGLN
VDPGNLSTHFREATWEEAMDLAGKELMRLRDEDPKSVAGFGSAKCTNEEAYLFQKFIRQG
FKHNNVDHCTRLCHASSVAALIENVGSGAVTATFNEIENADVAIVIGSNPIENHPVAATY
FKQFTKRGGKLIVMDPRGVGLRRFATEMVQFRPGADVSMLNAIMNVIVEEELYDSQYIHR
WTENWEAEKEHLKQFTPEKMSEICGISPDQLRRVARIFAGGNAGLIFWGMGISQHIHGTD
NSRCLISLALMTGNVGKPGAGLHPLRGQNNVQGASDAGLIPMFLPDYQTVTSDDVRKSFT
DVWGGGDFSNEKGLTVTEIVDQAYAGNIKGMYIQGENPAMSDPDADHAREAFAKLELMIV
QDIFLTETANYADIILPASALYEKNGTVSNTNRQVQRVRPAVAPPGEAREDWKVTVELAR
RIGLPWDYRDVSEVFNEMKLNMKSLNNITWERLETETITYPSLHETDPGQAIVFGDGFPR
PEGRARFTPASVIPPDEAPDADYPMIMTTGRQLEHWHTGSMTRRSLVLDAVEPEANCSLN
PRTLKLMGVEPGEMVRLSTRRGSIEIMARADRAIAEDMVFVPFAYVEAAANILTNPALDP
YGKIPEFKFSAVKVEKIEGQIAAE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaatcactttcacactcgatggcgaacaggtcacggcagacgcaggcctg
accatctgggaagtcgccaacggtcgcgggctgaaaatcccgcatctgtgccacaagccg
cagccggggtaccgtccggacggcaactgccgcgcctgcatggtggagatcgagggcgag
cgcacgctggccgcctcctgcatccgcgaacctgccgagggcatggttgtcaccaccaac
aacgcgcgcgcggaaggtgcccgcaagatggtgatggaactgctggttgccgatcagccg
aagcaggaagaggcgcgcgataagtcctcccatctgtgggatatggcagagctgaacggg
gtttcagagtcgcgctttcccaagctggaaaaggaccggatcccgctcttggacgacagc
catgtggcgatgaaggtcaatctggacgcctgcatctcctgtaacctctgcgtgcgcgcc
tgccgcgaagtgcaggtgaatgacgtgatcggcatggctggtcgcggccatgatgcctac
ccggtgtttgatatcgccgatccgatgggcgcgtcctcctgtgtggcctgcggtgaatgt
gtgcaggcctgtccgaccggggcgctgatgcctgcgaccgtgatggacgacaatcaggtt
ggggacagcaaggattacgacagcgaaaccgaaagcgtctgcccgttctgcggtgtcggc
tgcaaagtgtcgctgaaagtgaaggatggcaaggtcaagcatgttgagggcatcaatggc
ccggcaaacgagggccgcctgtgtgtgaaggggcggtttggctttgactacatccatcac
ccgcaccggctgaccaagccgctgatccgccgcgacgatgcgcccgccaagggcctgaac
gtcgatcccggcaacctttcgacccatttccgcgaagcgacctgggaagaggctatggat
ctggcgggcaaagagctgatgcgcttgcgggacgaagatccgaaatcggttgccggtttc
ggctccgcgaaatgcaccaatgaggaggcctatctcttccagaagttcatccgtcagggc
ttcaagcacaacaacgtcgatcactgcacccgtctgtgccatgcgtcctctgttgcggcg
ctgatcgaaaacgtcggctcaggggctgtgaccgcgaccttcaacgagattgagaacgcc
gatgtggcgatcgtgatcggctccaacccgattgagaaccacccggtggcggcgacctat
ttcaagcagttcaccaagcgcggcggcaagctcattgtgatggatccgcgcggcgtcggc
ctgcgccgctttgccaccgaaatggtgcagttccgcccgggtgccgatgtgtcgatgctg
aacgcgattatgaatgtgatcgtcgaagaagagctctatgacagccagtacatccaccgc
tggaccgagaactgggaagccgagaaagagcacctgaagcagttcacgcctgagaagatg
tcggaaatctgcggcatcagcccggatcagctgcgccgtgtggcgcggatttttgcaggg
gggaatgcgggtctcatcttctggggtatgggcatctcccagcacatacacgggacggat
aattcacgctgcctgatttcgctggcgctgatgaccggcaacgtcggcaaaccgggggcg
ggtctgcacccgctgcgtggccagaacaatgtgcagggcgcgtctgacgcgggcctcatc
ccgatgttcctgccggattatcagaccgtgacctcggatgatgtgcgcaaatccttcacc
gatgtctggggcggcggtgacttctcgaacgagaagggcctcaccgtgaccgagattgtc
gatcaggcctatgccggcaatatcaagggcatgtatatccagggtgaaaacccggcgatg
tccgacccggatgccgaccacgcgcgcgaggcctttgccaagctggagttgatgatcgtt
caggatatcttcctgaccgaaacggcgaactatgccgatatcatcctgccggcctctgcg
ctctatgaaaagaacggcaccgtgtcgaacaccaaccgtcaggtgcagcgggtgcgtcct
gctgtggcgcctccgggtgaggcgcgtgaggactggaaggtgacggttgagctggcgcgg
cgcattggtctgccctgggattatagggatgtcagcgaagtctttaacgagatgaagctg
aacatgaagtccctgaacaacatcacctgggagcgtctggagaccgagaccatcacctat
ccgtcgctgcatgagaccgaccccggtcaggcgattgtgttcggcgatggcttcccgcgt
cccgaaggccgcgcccgcttcaccccggcatcggtgatcccgccggatgaggcgccggat
gcggactatccgatgatcatgaccacgggccgccagctggagcattggcataccgggtcg
atgacccgccggtcattggttctggatgcggtggagccggaggcgaactgctcgctcaac
ccgcgcacgctgaagctgatgggagttgagccgggcgaaatggtgcgcctgtcaacacgc
cgtgggtcgattgagatcatggcgcgggctgaccgggccatcgccgaggacatggtgttt
gtgcccttcgcctatgtggaggctgctgccaatatcctgaccaatccggcgctggacccc
tacggcaagatccctgagttcaaattctcggcggtgaaggttgagaagatcgaagggcaa
atcgcagccgagtga
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