Phaeobacter sp. LSS9: D1820_07765
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Entry
D1820_07765 CDS
T05617
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1820_07765 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_07765 (uvrB)
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1820_07765 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1820_07765 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_19
Kinesin
UB2H
AAA
DUF87
eIF3_p135
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXT34871
LinkDB
All DBs
Position
1631542..1633743
Genome browser
AA seq
733 aa
AA seq
DB search
MPYAHSDKSMPMMADRAPQHRPKLEGGREFVMHTEFDPAGDQPTAIQELSAGVLDGERNQ
VLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDY
YQPEAYVARSDTYIEKESQINEQIDRMRHSATRSLLERDDVIIIASVSCIYGIGSVETYS
AMTQDLKVGDDYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLS
FFGEELEGITEFDPLTGEKTGSFDQIRVYANSHYVTPKPTLKQAVISIKEELKMRLDQLV
GEGKLLEAQRLEQRTNFDIEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIV
FADESHVSVPQIGGMYKGDHRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSAT
PAAWEIEQSGGVFAEQVIRPTGLLDPQVEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLT
KRMAEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERALGETNRRREKQ
IAYNEEHGITPATVKKNVEDVLAGLYEGDVDMNRVTATIDKPMHGANLEAHLAGLREQMR
KAAENLEFEEAARLRDEVKRLEAVDLAVSDDPLARQSAIEAASDAAVKSRGRSTAGKAGT
RAYRGKSQKKFSS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcccattccgacaaatccatgccgatgatggctgaccgcgcgccgcagcac
cgccccaagctggaaggtgggcgggaatttgtgatgcatacggagtttgatccggcgggc
gaccagcccaccgcaatccaggagctgtcagcaggcgtgctggacggcgagcgcaatcag
gtgctgctgggggcgaccggaacgggcaagaccttcaccatggcgaaggtgatcgaggag
acccagcgcccggccatcattctggcaccgaacaagacgctggcggcgcaattatacggc
gaattcaaaggcttcttcccggagaactccgtcgaatactttgtctccttctacgactat
taccagcctgaagcctatgtcgcgcgctccgacacctatatcgagaaggaaagccaaatc
aacgaacagatcgaccggatgcgccactccgccacccggtcgctgttggagcgggatgat
gtgatcatcatcgcgtctgtgagctgcatctacggtatcggctcggtcgagacctattcg
gcgatgacgcaggatttgaaggtcggcgatgactatgaccagcggcaggtgatggccgat
ctggtcgcgcagcaatacaaacgcaacgatcaggcgtttcagcgcggcagcttccgggta
cgtggcgattcgctggagattttccccgcccaccttgaggatcgcgcctggcggctgtcc
ttctttggtgaggagctggagggcatcaccgaattcgacccgctcaccggcgagaaaacc
ggctccttcgatcagatccgcgtctatgcgaattcccactatgtgaccccgaagccgacg
ctgaaacaggcggtcatttcgatcaaggaagagctgaagatgcggctggatcagctggtg
ggtgagggcaaactgctggaagcgcagcggctggagcagcgcaccaatttcgacattgaa
atgctggaggccaccggccattgcaacggaatcgagaattactcgcgctatctgacgggg
cgcgctccgggggagccgccccctaccctgtttgaattcatcccggacaatgccattgtt
tttgcggatgaatcccatgtttccgtgccgcagatcggcggcatgtacaaaggtgaccac
cggcgtaaattcacattggccgaacatggtttccgcctgccgtcctgcatggataaccgt
ccgctgaagtttgaggaatgggacgcgatgcgcccgcaatcggtctttgtctcggcaacg
ccggcggcctgggagattgagcaatcgggtggcgtctttgccgaacaggtgatccgccca
accggcctgttggatccgcaggtcgaaatccgcccggtggatatgcaggtcgacgatctg
ctggacgaggtgcgccgcgtcaccgcagatgggttccgcacgctggtgaccaccctcacc
aaacgcatggccgaggatctgaccgaatatatgcacgaacaggggatcaaggtccgctac
atgcacagcgacatcgacacgctggagcggatcgaaatcctgcgcgatctgcggctaggc
gcctttgacgtgctgatcggcatcaacctgttgcgtgaggggctggatatccccgaatgc
gggctggttgccattctggatgccgacaaggagggcttcctgcgctccgaaacctcgctg
gtccagaccatcggtcgcgcggcccggaatgctgaaggccgggttatcatgtatgctgac
cgcatcactggttcgatggaacgcgcccttggcgagaccaaccgccgccgcgagaaacag
atcgcctataacgaggaacacggcatcacccccgcgaccgtcaagaaaaacgtcgaggat
gtgctggcgggtctctatgagggcgatgtggatatgaaccgcgtcaccgcaaccatcgac
aaaccgatgcatggtgccaatctggaggcccatctggccgggctgcgcgagcagatgcgc
aaggccgccgagaacctggagttcgaggaagctgcgcggctgcgcgacgaggtcaagcgg
ctggaagcggtggatctggcggtctctgacgatccgctggcgcggcaatccgcgattgag
gccgcatcagatgcggcggtgaaatcacgcgggcgttccactgcgggcaaggccgggaca
cgggcctatcggggcaagtcgcagaaaaagttctcgtcgtag
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