Phaeobacter sp. LSS9: D1820_08935
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Entry
D1820_08935 CDS
T05617
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1820_08935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phq02000
]
D1820_08935
Transporters [BR:
phq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D1820_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4553
Motif
Other DBs
NCBI-ProteinID:
AXT35094
LinkDB
All DBs
Position
1880839..1882425
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AA seq
528 aa
AA seq
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MNLVKSALLASVMALPLASGAIADTPANALIVAQNIDDIVAIDPAQAYEFTSGELVTNLY
DRLVQYDAEDPTVLAPGLASAWDVDAEAKTIRFTLRDDAVFHSGNPVRGEDVVFSLARVI
KLNLTPAFILAQLGWTAENVDQMITTDGNNVTIKYEGEFSPAFVMNVLAARPASVVDKEV
VMANAVDGDMGNGWLNENAAGSGPFKLQGYRPAQMVRLAANADYFKGAPKMESVIIRHVA
EAATQELLLESGDIDMARNLTPDQIRGFDSDAIKVETYPQAAVHFLSFNQKTDSLTDPAV
WEAARYLVDYKGMTDTIINGQMEIHQAFWPKGFPGSYDDTPFGYDPERAKSILSEAGIET
PITVSLDVINAAPFTDMAQSLQASFADAGINFEILPGTGSQVITKYRERSHEAMLLYWGP
DFMDPHSNAKAFAYNSDNSDDNYAATTTWRNAWAVPDAMNAKTKAALTEADPEKRLEMYR
ELQAEVQKTSPIVIMFQAAYQVAMDADVSGYVNGATSDFVFYRLVEKN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgtgaaatccgccttgctggccagcgtgatggcgctgcctctggcgagcggc
gctatcgctgacacgcccgccaatgcgctgatcgtggcgcagaatatcgacgatatcgtc
gccattgaccccgctcaggcctatgaattcacctccggtgaactggtcaccaacctttat
gatcgcctggtgcaatatgacgccgaggatcccaccgttctggcgccgggccttgccagc
gcctgggacgtcgacgcggaggccaagaccatccgcttcaccctgcgcgacgatgcggtg
tttcactccggcaacccggtgcgcggtgaggatgtggtgttctcactggcgcgggtgatc
aaactgaatctgaccccggccttcatcctggcgcaactgggctggaccgccgagaatgtc
gatcagatgatcaccaccgacggcaacaacgtcactatcaaatacgaaggggagttttcc
cctgcctttgtgatgaacgtgctggccgcccgccccgcttcggtggtggataaagaggtg
gtgatggccaatgccgtggacggcgacatgggcaatggctggctgaatgaaaacgccgcc
ggctccggcccgttcaagctgcagggctatcgtccggcgcagatggtccggttggcagcc
aatgcggattatttcaagggcgcacccaagatggaaagcgtcatcatccgccatgtggcc
gaagccgccacgcaggagctgctgctcgaatccggcgatatcgacatggcccgcaatctg
acacccgatcagatccgtggctttgacagcgacgccatcaaggtggaaacctacccgcag
gcggcggtgcatttcctgtccttcaaccagaaaaccgacagcctgaccgaccccgccgtc
tgggaggctgcccgctatctggtggattacaagggcatgaccgacaccatcatcaacggc
cagatggagatccatcaggcgttctggcccaaaggcttccccggttcctacgacgacaca
ccattcggctatgacccggaacgcgcaaaatccatcctcagcgaggccgggattgagacc
ccgatcaccgtgtcgctggatgtgatcaatgcggccccctttaccgatatggcgcagtcc
ttgcaggccagctttgccgatgcggggatcaattttgaaatcctgcccggcaccggcagc
caggtgatcaccaaataccgtgagcgcagccatgaggcgatgctgctctattggggcccg
gatttcatggatccgcattccaatgccaaggctttcgcctataactccgacaactcggac
gacaactatgcggccactaccacatggcgcaatgcctgggcggtaccggacgcgatgaac
gccaagaccaaggcagccctcaccgaggcggatcctgaaaaacggctggagatgtaccgt
gaattgcaggccgaggtgcagaaaacctctcccatcgtgatcatgttccaggccgcctat
caggtggcaatggatgcggatgtctctggctatgtgaatggcgcgacatccgattttgtc
ttctaccgtctggtggaaaagaattga
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