Phaeobacter sp. LSS9: D1820_09820
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Entry
D1820_09820 CDS
T05617
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03030
DNA replication
phq03430
Mismatch repair
phq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1820_09820
03430 Mismatch repair
D1820_09820
03440 Homologous recombination
D1820_09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phq03032
]
D1820_09820
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_09820
Enzymes [BR:
phq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1820_09820
DNA replication proteins [BR:
phq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1820_09820
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1820_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
AAA_14
AAA_16
AAA_24
Rad17
TIP49
SLFN-g3_helicase
AAA_18
DUF815
AAA_assoc_2
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
AXT35251
LinkDB
All DBs
Position
2064983..2066803
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AA seq
606 aa
AA seq
DB search
MSDTAGDTAGQSQYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGT
GKTTTARIIAKGMNCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDI
REIIDSVQYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPV
TVLSRCQRFDLRRIEPEVMIALLQKIAGAENAQIAEDALALITRAAEGSARDATSLLDQA
ISHGAGETTADQVRAMLGLADRGRVLDLIDMILRGDAAAALTELSAQYAEGADPLAVLRD
LAEITHWVSVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKALEEVAAA
PNAMMAAEMAVIRLTHVADLPTPEQLMRTLQDTPPPPPPSGHMNAPTGNSGGPSGAPQGA
GGYVPQQPGPQGGIPSGPQGGPTMSTGNGQATALAPQVDSALARYPSFEHVIELIRVKRD
GLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTHARWVISLANEGGGE
TITERDNAAENALRAEASTHPMVQAVLESFPKAKIKHIRTAEDLAAEVEADALPEVEDEW
DPFEEE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacagcaggcgacacagcaggccaatcccaataccaggttctggcacgcaaa
taccggcccgaaacctttgccgatctggtgggccaggacgccatggtgcggacgctgaaa
aacgcctttgccgccgaccggattgcccaggccttcatcatgacgggcattcgcggcact
ggtaagacgacaaccgcacggatcattgccaagggcatgaactgtatcggcgaggatggt
cagggaggccccaccacagaaccctgcggcaaatgcgaacattgcacggcgatcatggaa
ggtcggcatgtcgatgtgatggagatggacgccgcctcgcgcaccggggtgggtgacatc
cgcgaaatcatcgattcggtgcagtaccgggcagcctctgcccgctataagatctacatt
atcgacgaagtccacatgctgtcgacctccgccttcaacgcgctgttgaagacgctggag
gaaccgcccgcacatgtgaaattcatcttcgccaccacagaaatccgcaaggtgccagta
acggtactgtcgcgctgccagcgtttcgatttgcgccggattgagccggaggtgatgatt
gcactgttgcaaaaaatcgcaggcgctgagaatgcccaaatcgccgaggacgcgctggcc
cttatcacccgcgccgccgaaggctctgcccgcgatgccacctcgctcctagatcaggcg
atttcgcatggcgccggcgagacaaccgcggatcaggtccgcgccatgttggggctggcg
gatcgcgggcgggtcttggacctcatcgacatgattttgcgaggcgatgcggctgcggcg
ctgaccgaactcagtgcgcaatatgccgagggcgccgacccgctggccgtgctgcgtgat
ctggccgagatcacccattgggtgtccgtggtgaaaatcacccccgatgcggctgaagat
cccaccgtcagcccggatgagcgcgcccgtggcagccaaatggccgaggcgctgccgatg
cgtgtcctgacgcggatgtggcagatgctgctgaaggcgctggaagaggtcgccgcagcc
cccaatgcgatgatggcggccgaaatggcggtgatccgcctgacccatgtggcagatctg
ccgacgcctgaacagctgatgcgcaccctgcaggatacgccgccgcccccgccacccagc
ggtcatatgaacgcgccgacggggaactctggcggaccatctggcgccccccaaggcgca
ggcggttacgtcccccagcaacccggaccgcagggcggcattccaagcggtccccagggc
ggaccaacgatgtcgacaggcaacggacaggcaaccgcgctcgccccgcaggtagatagc
gcgcttgcccgctatcccagctttgagcatgtgatcgaactgatccgggtaaagcgcgac
ggtttgctgctggaatatgtgaaaacctacctgcgtctggtgtcctatcaacccggccgg
atcaccatccagcccacggatgacgcgcccaaggatctcgccgcgcgtctgggccagcag
ttgcagacctggacccatgcccgttgggtgatctccctcgccaatgagggtggcggtgag
acgatcaccgaacgtgacaacgccgcagagaacgccctgcgagcggaggccagcacccac
ccgatggtgcaggcggtccttgagagcttccccaaggcgaagatcaaacacattcgcaca
gcagaagatctcgccgccgaggtcgaagcagacgccctgccggaggtcgaagacgaatgg
gatcccttcgaggaagagtga
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