Phaeobacter sp. LSS9: D1820_11345
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Entry
D1820_11345 CDS
T05617
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phq03000
]
D1820_11345
Transcription factors [BR:
phq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D1820_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AXT35520
LinkDB
All DBs
Position
complement(2355489..2356517)
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AA seq
342 aa
AA seq
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MTGSAPEASVTSGGVPPGGRQWRVDIILTEGFVLTEFSAVVEPLRLANRVLAQPPFSWTM
RSAGGGRVGCRAGAYVETEPFAAKADADCVFVLGNTDPDCPALSMGSLISTYRTRGAKVY
LLAEAASRYIRDSGKDGAQHTTHWENTNLMRERIGLFDANFALASEDGQVVTCAGMGATV
DIVLALIGQLTTAAAQVTVANILLHDKVRDFASLQPFSGVKPTITGDADLDQAIHVMQEH
IEEPLPINEIVDHLGISTRSLERKFKTFLGTTPNGFYREMRLNKANNLLLNTTMSVREIG
LACGFSNGFSTLYKAFFGMTPFALRKSRRVSQSHQQRRKSTG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccggctccgcgcctgaggcatctgtgacctccgggggggtacccccggggggacgt
cagtggcgggtcgatatcatcctgacggaaggttttgtgctcactgagttttctgctgtg
gtggagcccttgcggctggccaatcgtgtgctcgcccagccaccgttctcctggacaatg
cgctctgctgggggcgggcgggtcggatgccgtgctggcgcttatgtcgagacggagcct
ttcgcggcgaaagcagatgccgattgcgtgtttgttttgggcaatacggatcccgactgt
ccggcgctgtcgatgggatcgctgatcagcacctaccgcacgcgcggggccaaggtctat
ctgctggcagaggccgccagccggtatatccgtgacagtggcaaggacggagcccagcac
acgacgcattgggaaaacaccaacttgatgcgtgaacgcattggattgttcgacgccaat
ttcgcgctggcgagtgaagatgggcaggtggtgacctgtgccgggatgggggcgacggtg
gacatcgttctggccctgatcggacagctgaccacggcagccgcgcaggtgacggttgcg
aatatcctcttgcacgacaaggtgcgggacttcgcgtcgttgcagccgttttcgggtgtg
aaaccaacgatcaccggcgatgcggaccttgatcaggccattcacgttatgcaggagcac
atagaggaaccgctgccgatcaatgagatcgttgaccatctcgggatttcgacccgatct
ctggaacgcaagttcaagacctttctcggcacgacacccaatggtttctaccgggagatg
cgtttgaataaggccaataacctcttgctgaacaccacgatgagcgtgcgtgagatcggt
ttggcctgcgggttctccaatgggttttcgaccctgtataaggcgttttttggcatgaca
ccctttgctctgcgcaaatcacggcgcgtgtctcagtcacaccagcagcgtcgaaaatcc
acaggatag
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