Phaeobacter sp. LSS9: D1820_12100
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Entry
D1820_12100 CDS
T05617
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phq03032
]
D1820_12100
03036 Chromosome and associated proteins [BR:
phq03036
]
D1820_12100
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_12100
DNA replication proteins [BR:
phq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D1820_12100
Chromosome and associated proteins [BR:
phq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
D1820_12100
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
D1820_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
GP68
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AXT35658
LinkDB
All DBs
Position
2513129..2513416
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AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVAALAEEMDSDKKAAGAALDAVCALITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFTKEADKVVKMTIAKALKDSVNG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgatgaccaagacccagcttgttgccgcactggctgaagagatggacagc
gataagaaggccgcaggcgcagcgcttgacgctgtttgcgcgctgatcactcgcgaagta
tccggcggtggcgctgtgactctgcccggcgttggcaagatctactgccgcgagcgcccc
gagcgcgaagtgcgcaacccggccaccggtgagaagttcaccaaagaggccgacaaggtg
gtcaagatgaccatcgccaaagcgctgaaagacagcgtgaacggctaa
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