Phaeobacter sp. LSS9: D1820_12470
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Entry
D1820_12470 CDS
T05617
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D1820_12470 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_12470 (mutS)
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
D1820_12470 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AXT35725
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Position
2593548..2596181
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AA seq
877 aa
AA seq
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MSTVTPMMAQYLDIKAQYPDALLFYRMGDFYEMFFDDAVNAAEALDIALTKRGKHDGNDI
PMCGVPVHAAEGYLLTLIRKGFRVAVGEQLESPAEAKKRGSKSVVKRDVVRLVTPGTITE
DSLLEARRHNFLTAYCEMRDQSALAWADISTGAFHVMPVASVRVSPELARLAPSELIVPD
GPALDQLRAIAEDHQIPVTPLAKSSFDSTAAEKRICDLFKVSTLESYGSFNRAEISAMGA
VIDYLDITQKGKLPLLQPPQQEAEDRVVQIDAATRRSLELTRSLTGGRGGSLLAVVDRTV
TPAGGRLLEQRLSSPSRNLDVIRSRLTALDFVVEQTQLAQSLRAALRKTPDLDRALSRLA
LDRGGPRDLAAVRNTLIQSEAISDLCDRADMPALLQQALSGLTGFDDLLPLLDAALIAEP
PLLARDGGFIAEGYDSELDEARTLRDEGRSVIAALQKKYSDHTGINSLKIKHNNVLGYFI
ETTATHAEKMLSAPLSETYIHRQTTANQVRFTTVELSEIETRILNAGNLALEIEKRLYTR
LSDAILANAALLNAAARGLAELDLVTALADLALGENWSCPTVDSSREFSISGGRHPVVEQ
ALRQQGGSSFVANDCDLTADTGAAIWLLTGPNMAGKSTFLRQNALIAILAQMGSYVPANS
AHIGLISQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDG
LSIAWATLEHLHEVNRARALFATHYHELTQLAGKLPGVDNATVSVKEWEGEVIFLHEVKK
GAADRSYGVQVAQLAGLPGSVVARARDVLDMLEEGSRSGAGKIQIDDLPLFAAAPPPQPA
APVGPSPVEMLLDDIHPDDLSPREALEALYRLKEAGS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacagtcacgccgatgatggcccaatacctcgacatcaaggcgcagtacccggat
gccctcttgttctaccgcatgggcgatttctacgagatgttctttgacgatgccgtcaac
gcggcagaggccctcgacatcgcgctgaccaaacgcggcaaacacgatggcaacgacatc
ccgatgtgtggtgtcccggtccatgccgccgagggctatctgttgaccctgatccgcaaa
gggtttcgcgtcgccgttggcgaacaattggaaagcccggcagaagccaagaaacgtggc
tccaaatcggttgtgaaacgggatgtcgtgcgactggtcacccccggcaccatcaccgaa
gattccctgctggaggcgcgccgtcacaatttcctcaccgcttattgcgagatgcgcgat
cagtccgccctcgcctgggcagatatttccacaggcgcgttccatgtgatgcccgtcgcg
tccgtccgggtgtcccctgaactggcccggctggcgccatcggagttgatcgtccccgat
ggccctgccttggaccagctgcgcgccattgcagaggaccaccagatcccggtgacccct
ctggcgaaatccagcttcgacagcaccgccgctgaaaaacgcatctgtgatctcttcaaa
gtctcaacactggaatcttacggctccttcaaccgggcagagatttcggccatgggcgcg
gtcatcgactatctcgacattacacagaagggtaagctgccactgcttcagcccccacaa
caagaggccgaggacagggttgtgcagatcgacgctgcgacccgtcgtagcctagaactc
acccgctcactgactggcgggcgcggcggctcactgcttgcggtggtggatcgcaccgta
acccccgccggcggtcggcttcttgaacagcggctgtccagcccatcgcgcaacctcgat
gtgatccgatcccggttgacggcgctggacttcgtggtggagcaaacgcaactcgcgcaa
tctctgcgcgctgctctgcgcaagacacccgatctggaccgggccctgtcccggcttgcc
ctggatcgcggcggccctcgggatctcgctgcggtacgcaacaccctgatccagtccgaa
gctatttcggacctctgtgacagggcagatatgccggcacttctacaacaggcgctctcc
gggctgaccggatttgacgatctgctgcccctgcttgatgcggcgctgattgcagagccg
ccgctcttggcccgcgatggcgggtttattgcagagggctacgacagcgagctggacgag
gcccgcacactccgtgatgaaggtcgctccgtcattgcagcgctgcaaaagaaatactcc
gatcacacgggcatcaactcgctgaaaatcaagcacaacaatgtgctcggctacttcatc
gagaccaccgcgacccatgcagagaaaatgctctccgcccccctgtcggagacctatatt
caccgccagacaacagccaatcaggttcggttcacaacggttgagttgagcgaaatcgag
acccgtattctgaatgccggtaatctggcattggagattgaaaagcggctctataccagg
ctatcagacgctattctggcaaatgcggctttgctgaatgcagcagcgcggggactggca
gaacttgacctggtcaccgccttggccgatctcgctcttggtgaaaactggtcctgccca
acggtagacagctcgcgcgagttcagtatttcaggggggcgacaccccgttgtggaacag
gcactgcggcaacagggtggcagcagcttcgttgccaacgactgtgacctcaccgccgat
acaggggccgccatctggctgctgaccggtccgaacatggccggtaaatcaacctttctg
cgccagaatgccctgattgccatccttgcccaaatggggagctacgtgccagcgaacagc
gcccatatcggactgatcagccagttgttcagccgggttggtgcctcggacgatctggca
cgcgggcgctcgaccttcatggttgagatggttgaaaccgcggccatcctcaatcaggca
gatgatcgcgcactggtcattctcgacgaaatcgggcgcggtactgcgacctatgacggg
ctgtcgatcgcctgggccacgctggaacatctgcatgaggtcaatcgcgcccgcgcgctg
tttgcgacccattaccacgaactcacccagctcgccggcaagctgcccggcgtcgataat
gccaccgtttcggtcaaggaatgggaaggcgaagtcatctttctgcacgaggtcaagaaa
ggcgcggcagatcgctcctacggggtacaggtcgcgcagcttgccggcctgcccggatcg
gttgttgcacgggctcgggacgttctggacatgctggaagagggcagccgcagtggcgcc
ggcaaaatccagatcgacgatcttcccctcttcgctgccgccccaccgccgcaaccagca
gcaccggtcggcccctcaccagtcgaaatgctcctggacgacatccaccctgatgatctc
tcaccacgggaagcactggaagcgctttatcgcctgaaagaagccgggagctga
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