Phaeobacter sp. LSS9: D1820_12525
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Entry
D1820_12525 CDS
T05617
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phq03016
]
D1820_12525 (mnmE)
Transfer RNA biogenesis [BR:
phq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
D1820_12525 (mnmE)
Prokaryotic type
Methyltransferases
D1820_12525 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
ABC_tran
RsgA_GTPase
AAA_29
FtsK_SpoIIIE
AAA_18
Ras
TniB
Motif
Other DBs
NCBI-ProteinID:
AXT35735
LinkDB
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Position
complement(2605124..2606416)
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AA seq
430 aa
AA seq
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MDTIFALASAQGKAGVSVIRLSGPKATSTASVISGGALPCPGRALRVLSDRSKARIDEAL
VLTFAGPNSFTGEDTVEFQVHGSTSVVSAMLDLLGQFKDVRLADPGEFTRRALENGKLDL
SQVEALADLIDAETEAQRVQAQAVLAGGLSDLAERWRKDLIRAASLIEVTIDFADEDVPV
DVTEEVKELLAGVTADLEPQISGVQMAERIRSGFEVAIIGAPNVGKSTLLNALAGREAAI
TSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDYVEGIGIKIAKKRAEAADLRVFLT
KDRHAIDIDILEDDIVVTPKADLINNGASEKAVSGQTGQGIDVLIADITKALKNRAGKAG
IATRARHRETMKTAYDRLKAAQDVLKYGPEFYDVAAEDLRSAIRALEMLVGRVGVENLLD
EIFSSFCLGK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatctttgcgctggcctccgcccaagggaaggccggcgtttcggttatacgc
ctctctggcccaaaggctaccagcaccgcttctgttatcagtggcggtgctttgccctgt
cctggtcgggcgttgcgcgttctgtctgatcgcagcaaggcgcgtatcgacgaagccttg
gtgctcactttcgccggcccgaatagcttcactggtgaggataccgttgaatttcaggtc
catggcagcacatcggttgtcagcgccatgcttgatctattgggtcagtttaaagatgtg
cggctggcagacccaggtgagtttacccgccgtgcgcttgaaaatggtaagctggacctc
tcccaggttgaggcattggcggatttgatcgatgcagagaccgaggcgcagcgggtacag
gcgcaagccgtgctcgccggcgggctttctgacttggctgagcgctggcgaaaagacctt
attcgcgctgcatccctgattgaggtaacaatcgatttcgccgatgaagatgttcccgta
gatgtcactgaggaagtcaaagagcttttggccggcgtgacagcggatttggaacctcaa
atttctggcgtacagatggctgaacggattcgcagcgggtttgaggttgcaatcatcggc
gcgccaaacgttggcaagtcaacactactcaacgctctggccggccgagaggctgctatc
acatcggaatatgccgggacgacccgggacgtgatcgaggtaaggatggatttggcgggt
ctacctgtcactcttcttgataccgctggcctgcgcgagactgacgattatgtcgaaggg
atcggcatcaaaatagcgaagaaacgggcagaggcggcagaccttcgcgtgtttttgacc
aaggatcgacatgcaattgatatcgatatccttgaggatgatattgttgttaccccaaag
gcggatctgatcaacaatggtgcttctgaaaaagcggtttccggacaaacggggcagggc
atagacgtgctgatcgcggatatcaccaaagcgctgaaaaatcgtgctggtaaagcaggt
attgcgacgcgtgcacggcatcgagagacaatgaagacggcatatgaccgcctgaaagcc
gcgcaagatgttctaaaatacggcccagagttttatgatgttgctgctgaagatctgcgt
tcggccattcgcgccctggagatgctggttggccgtgtaggggtagagaacctgttggat
gaaatcttctccagtttttgcttgggaaagtaa
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