Phaeobacter sp. LSS9: D1820_12625
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Entry
D1820_12625 CDS
T05617
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phq03400
]
D1820_12625 (addA)
Enzymes [BR:
phq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1820_12625 (addA)
DNA repair and recombination proteins [BR:
phq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D1820_12625 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXT35755
LinkDB
All DBs
Position
complement(2621053..2624421)
Genome browser
AA seq
1122 aa
AA seq
DB search
MTARDAASEAQFRAARPDASTWLAANAGSGKTKVLTDRVARLLLRGVQPQHILCLTYTKA
AASEMQNRLFKRLGEWAMLGDDALTSALTDLGAHDVISAEGMAQARTLFARAIETPGGLK
IQTIHSFCASLLRRFPLEAGVSPQFSEMDDRAAVLLRGEVVEAIANSENPEEAGLIARLA
RQVTDSDFETLTAAICQRRSDFEAPLDRAGLRRLFDLPTDFDAKMLEQSIYLGGEGDLLA
RTCTMLEQGGSTDAKAAAKLRKITEPTIADLPVLESVFLTGASAKAPFTAKINAFPTKKL
RESNVALMDQLEPLMRRVEAARAQRLALAAVEKSLILHDFAAAFLPEYDRRKQLRGWLDF
DDLILKARQLLNDPAVAAWVLYRLDGGIDHILVDEAQDTSPVQWDVVEKLAQEFTAGEGA
RSEVERTIFVVGDKKQSIYSFQGADPDAFDRMQAEFADRLAETGSALQNAALEFSFRSSA
AILGLVDLVFKDSPGAGFHRDALHRAFKSELPGRVDLWPVVDKVDTEEERDWTDPVDRPG
ARHHTVILADRIATTIKEMIDSKVTLPEDGPERGSFRRRPVRAGDFLILVQRRSELFSEI
IRACKAARLPIAGADRLKIGAELAVKDLAALLSFLATPEDSLSLAAALKSPLFGWDEQTL
FDLAHRREGGSYLWTALRDRAAEYPDTMAIIDDLRSQTDFLRPYDLIERILTRHGGRRRL
LGRLGPEAEDGINALLSQALAYERTDIPSLTGFLVWMQADDLEIKRQMGAAGNMIRVMSV
HGSKGLEAPIVILPDTAKRRPPRDDEIMRAEAGPMWKLPSAQMPDVMQAARETAQEKARN
ERLRLLYVALTRAEKWLIVAAAGELSKDGDSWYQMVERALQEAGANPYDTGNGEGLRLQH
GNWDGLPFHADPPVVTSTPQLPEVFKQLPPPYQPPTSTLSPSELGGAKALPGDLGQDEDI
AKARGSRLHSLLEHLPSADQDSWPQLAEALLAGHEDTADLLVEATRVLTNPDLGAIFAPD
TLAEVAITADLDGRRIHGVIDRLIVTPDRVQAIDFKSNATVPTSVEACPEGLLRQMGAYA
HALAALYPDRRIDTALLWTRTATLMDLPHDIVSSALKRRQIP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcgacgccgcctcagaggcgcagtttcgcgccgcgcgccccgatgcctca
acctggctggccgcaaatgccggctctggcaagaccaaggtgctgacagatcgcgtggcc
cgtctgttgctgcgtggggttcaaccgcaacacatcctgtgcctgacctacaccaaggcc
gctgccagcgagatgcagaaccgcctgttcaaacggctcggcgaatgggccatgctgggc
gacgatgcgctcacttctgcactgacagatctgggcgcccatgatgtcatctcggccgag
ggtatggcgcaagcccgcaccctgtttgcgcgtgcgattgagacgcccggtggcttgaaa
atccagaccatccattccttttgcgcctcgctgctgcgccggttcccgctagaggccggc
gtcagcccacagttttccgaaatggacgaccgcgccgcggtattgctgcggggcgaggtg
gtagaagccatcgcaaacagcgaaaacccggaggaggccggtctgatcgccagactggcc
cggcaggtgaccgatagcgattttgagacgctgaccgccgcaatctgtcagcgccgctcc
gattttgaggcgccactggaccgcgccggattgcgcaggttgttcgatcttccgacggac
tttgacgccaaaatgttggagcaaagcatctatctgggcggcgagggggacctgctggca
cgcacctgtactatgttggaacagggtggcagcaccgatgccaaggccgctgcgaagctg
cgcaaaatcaccgagccgacgattgcagatttgccagttcttgagtctgtgtttctgact
ggcgcctccgcaaaggcgccctttaccgccaaaatcaatgcctttcccaccaagaaactg
cgggaaagcaatgtcgcgctgatggatcagctggaaccactgatgcgacgggtagaggcg
gcccgcgcccagcgcctcgccctggccgcagttgagaaatcgctgatcctgcatgacttc
gccgctgcattcctgccggaatatgatcgccgtaaacagctgcgtggctggctcgacttt
gacgacttgatcctgaaggcacgtcagctgctcaatgatccggcggtggctgcttgggtt
ctctaccgactggacggcggcattgatcacatactggtggatgaggcgcaggataccagc
ccagtgcaatgggatgtggtcgaaaaactggcgcaggagtttaccgcaggggagggcgcg
cgatccgaggtcgagcgtacgatttttgtcgtcggtgacaagaaacagtcgatctattcc
tttcagggggcagatccggacgcctttgacaggatgcaggcggaattcgccgaccggctc
gcggaaaccggcagtgcgctgcagaacgcggcgctggaattctcgttccggtcctccgcg
gcgatccttgggctggttgatctggtgttcaaggatagccccggcgccgggtttcaccgc
gatgccctgcaccgcgcctttaaatcggaattgccgggacgggtcgatctttggccagtc
gtggacaaagttgacaccgaagaagagcgtgactggaccgatccggtggatcgccccggc
gcgcgccatcacactgtcattctggcggaccggatcgcaaccacgatcaaggagatgatc
gacagcaaggttaccctgccggaggatgggcccgagcgtggcagcttccgccgtcgcccg
gtacgggccggtgattttctgattctcgtgcagcgccggtccgagctgttctcggaaatc
atccgcgcctgcaaggctgcaaggctgcccatcgccggcgcggaccggttgaagatcggc
gcagaactggcggtgaaggatctggcggcgctgctgtcctttctcgccacgcctgaggat
tccctgtcgctggctgcagcgctgaaatcgccgctgtttggctgggacgaacagaccctg
tttgatctggcccaccggcgcgagggcggcagttatctctggaccgcgctgcgggatcgc
gcagcggaataccctgacacgatggccatcatagatgatctgcgcagtcagaccgatttc
ctgcgtccctatgacctgattgagcggatcctgacacgtcacggcggacgtcggcgcctg
cttggccggttgggaccggaggcggaggatggcatcaacgccctgctcagtcaggcactg
gcctatgagcgcacggatattcccagcctgaccggatttcttgtctggatgcaggccgac
gatctggaaatcaaacgccagatgggcgcggcgggcaatatgatccgggtgatgtcggtg
catggatcaaaaggcctggaagcaccgattgtgatcctgcccgacaccgcaaaacgcaga
cctccacgcgatgatgaaatcatgcgcgccgaggctgggccgatgtggaaactgcccagc
gcccagatgcccgatgtgatgcaagccgcccgcgagaccgcgcaggagaaggcacggaat
gaacgtctgcggctgctctacgtggcgctgacacgtgctgaaaaatggctgattgttgcc
gctgcgggtgagctgtccaaggatggggacagttggtaccagatggttgagcgcgcgctg
caagaggccggtgccaacccctatgataccggcaatggcgagggcctgcggctgcagcat
gggaattgggacgggctgccgtttcacgcagatcccccggtggtcacgtccacgccgcaa
ctgccggaggtgttcaaacagttgccaccgccctatcagccaccaacctcaacactcagc
ccgtcggaattgggcggggccaaggccttgccgggggatctgggacaggacgaagatatc
gccaaggcgcgcggcagtcggctgcacagcctgctggaacatctacccagcgcagatcag
gatagctggccccaactggcggaggctttgctcgcggggcatgaagacaccgcagatctt
ctggttgaggcgacacgtgttctgaccaatccggacctgggtgcgatcttcgctcctgac
actttggcggaggttgcgataaccgcagatctggatggccgtcgcattcacggcgtgatt
gaccggctgatcgtgacgccggaccgggttcaggcgattgatttcaaatcgaacgccacc
gttcccaccagcgtggaggcctgtcctgaggggctgttgcggcaaatgggggcttatgcc
catgcgctggcagccctctaccctgatcggcggattgacacggcgttgctttggacccgt
accgcgacgctgatggacctgccacacgatattgtgtcatccgcccttaagcgccgccag
ataccttga
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