Phaeobacter sp. LSS9: D1820_12980
Help
Entry
D1820_12980 CDS
T05617
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phq03016
]
D1820_12980
Enzymes [BR:
phq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D1820_12980
Transfer RNA biogenesis [BR:
phq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D1820_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
LytR_cpsA_psr
RNase_T
CNOT1_HEAT
Motif
Other DBs
NCBI-ProteinID:
AXT35818
LinkDB
All DBs
Position
complement(2691243..2691857)
Genome browser
AA seq
204 aa
AA seq
DB search
MANHLYQNDLPDRLDLGPVVAIDCETMGLNPHRDRLCVVQLSGGDGNAHMVQIAKGQTAA
PNLCAMLEDPKVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLVRTYTDRHGLRNLT
QELIGVDISKQQQMSDWGAAQLSDAQLDYAASDVLHLHRLRAALDKRLDREGRSEMAQAC
FDFLPMRAKLDLAGWPDADIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttggccaatcacctctatcaaaacgacctgcccgaccggctcgatctggggccggtggtc
gcgatcgactgcgagacgatgggcctcaacccgcatcgggatcggctctgtgttgtccag
ctgtcgggcggtgacggcaatgcccatatggtgcagatcgccaaagggcagaccgcagcg
ccgaatctttgcgcgatgctggaggaccccaaggttctgaaattgtttcattttggccgg
ttcgatattgccgcgatgtatcatgcctttggcgcattggctgccccggtgtattgtacc
aagatcgccagccgcctggtacgcacctatacggatcgccatgggctgagaaacctgacg
caggagctgatcggcgtggatatttccaaacaacagcagatgagcgactggggtgccgcg
cagctgagcgacgcacagcttgattatgccgcctccgacgtgttgcacctacaccgtttg
cgcgccgctctggacaagcgtctggatcgcgaaggccgcagtgaaatggcccaggcctgc
ttcgatttcctgccaatgcgcgccaagttggacctcgcaggttggcccgacgcagacatc
tttgcacactcatga
DBGET
integrated database retrieval system
