Phaeobacter sp. LSS9: D1820_13595
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Entry
D1820_13595 CDS
T05617
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00550
Peptidoglycan biosynthesis
phq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D1820_13595 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phq01003
]
D1820_13595 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phq01011
]
D1820_13595 (pbpC)
Enzymes [BR:
phq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
D1820_13595 (pbpC)
Glycosyltransferases [BR:
phq01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
D1820_13595 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
phq01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
D1820_13595 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
AXT36814
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All DBs
Position
2838634..2840661
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AA seq
675 aa
AA seq
DB search
MMGLCAVAVIGGVAFDDWVEKTPMPATLAETATEVRDRNGQLLRAYPVADGIWRMAVTVD
QVDAGYRAMLLRYEDKRFYDHSGVDPLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDG
STGRWAGKLRQIRLALALERRLSKAQILELYLIHAPFGGNLEGVRAASYAWFGKEPSRLT
PAEAALLVALPQAPEARRPDRAPEKARLARDWVLQRMRNAGLLTADAAEAAARAPMPRRM
RGFPQLAPHLADDLVADTPEQARIDLTLEAGLQQRLAQLLAQSVARQDARLSAAVLVADH
QSGEILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGLAFDQGLAHPETLIHDGP
IDIDGYAPQNFDGRFRGDLRIRRALQLSLNTPVIQLMQALGPARLMAALRRGGAHPRLPG
GKPGLAVALGGVGVSLRDLVQVYAGLAAGGQGPRLRARLDAPYERMPRLMSKVSAWQIGD
ILRGVPPPAGAPAGMLAYKTGTSYGHRDTWAIGWDGRYVVGVWLGRADGTPVPGAFGAEL
AAPLLFEAFGRIGRGFTPLPAAPASTLRVATAELPLPLQRFDRGSVGGPPGARLQLAFPP
DGAALLLAEGGQMTLRIKGGEAPFLVLANQTPVVTGARRRSIDLSGLDRGFSTLVVVDRN
GRSDQVRVRITRPDE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ttgatgggtctatgtgcggtcgcggtgatcggcggtgtggcctttgatgattgggtcgag
aagacgccgatgccagcgacgctggcggagaccgcgacagaggttcgcgaccgcaacggg
caattgctgcgagcctatccggtggcggatgggatctggcgtatggctgtgacggtggat
caggtcgacgcgggctatcgcgcgatgttgctgcgctatgaggacaagcgattctatgac
cacagcggtgtcgatccgctggcgttgttgcgcgcggcggcacaggccctgtggcggggg
cgggtggtctcaggcgggtcaacgctgagcatgcaggtggcgcggctgttggaggatggc
agtaccgggcgctgggcgggcaagctgcggcagatccggctggcgctggcgttggaacgc
cgcctcagcaaggcgcagattttagagctgtatttgatccacgcgccttttggcggcaat
ctcgaaggggtgcgggcggcgagctatgcctggttcggcaaggagccgtcgcggttgacc
ccagccgaggctgccctgctggtggcgttgccgcaggcccctgaggcgcgccgcccggat
cgcgcgccggaaaaggcacggttggcccgcgactgggtgttgcagcggatgcgtaatgcc
gggctgctgacggctgacgcagcagaggccgcagcgcgggcgccgatgccacggcgcatg
cggggttttccacagctggcgccacatctggcggatgatctggtggcagatacaccggag
caggcgcggattgatctgacccttgaggcgggactgcagcagcgtctggcgcagcttctg
gcgcagagtgtggcgcggcaggatgcgaggctctctgcggcggtgctggtggcggaccac
cagagcggcgagatcctcgcctctgtcggatcgtccgggtaccgcgatgatctgcggcag
gggtttgtcgatatgacacgcgccccacggtcccccggatcgacgctgaaaccgctggtt
tacggtcttgccttcgatcaggggctggcccatccggagacactgatccacgatggtccg
attgatattgatggctatgcaccgcagaatttcgatggccgctttcggggggatctgcga
atccggcgggcgctgcagctgtcgctgaacacaccggtgatacagctgatgcaggcactg
ggcccggcgcggctgatggcggcgttgcggcggggcggcgcgcacccccggttgcccggc
ggcaagccagggctggcggtggcgctcggtggggtcggcgtgtcgctgcgggatctggtg
caggtttacgcggggctggcggctggtgggcaaggcccccggctaagggcgcgtctggat
gccccttacgagcggatgccgcgtctgatgagcaaggtttctgcctggcagatcggcgat
attctacgcggtgtgccgcctcccgccggggcgcctgcgggtatgctggcttataaaaca
ggcacatcctacggccaccgcgatacctgggcgatcggatgggatggccgctatgtggtg
ggtgtctggctggggcgggcggatggcacaccggtgccgggagcctttggtgcggaactg
gcggcgcccctgctgtttgaggcctttgggcggattggtcgcggatttacccccttgcca
gcggcgcctgcctcgaccctgcgcgttgcgacggcggagttgccgctgccattgcagcgc
tttgacagggggagtgttggtggtccacccggcgcgcggctgcagctggcctttcctccg
gatggggcggctctgctgctggcggagggcgggcagatgaccctgcggatcaagggcggc
gaggcgccgtttctggtgctggccaatcagacgcctgtggtgaccggtgcccgccgtcgc
agcatcgacctgtcagggctggaccgtgggttttcaacgctggttgtggtcgaccgtaac
ggccggtcggatcaggtgcgggtgcgcatcacccgcccggacgagtaa
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