Phaeobacter sp. LSS9: D1820_14165
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Entry
D1820_14165 CDS
T05617
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00061
Fatty acid biosynthesis
phq00071
Fatty acid degradation
phq01100
Metabolic pathways
phq01212
Fatty acid metabolism
phq02024
Quorum sensing
Module
phq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D1820_14165
00071 Fatty acid degradation
D1820_14165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1820_14165
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phq01004
]
D1820_14165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phq04147
]
D1820_14165
Enzymes [BR:
phq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D1820_14165
Lipid biosynthesis proteins [BR:
phq01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
D1820_14165
Exosome [BR:
phq04147
]
Exosomal proteins
Exosomal proteins of breast milk
D1820_14165
Exosomal proteins of breast cancer cells
D1820_14165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AXT36022
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All DBs
Position
2969240..2971177
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AA seq
645 aa
AA seq
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MGITVTQTVVAADRRAEQDGATAPLPQVVLNGASYNATPGQRPVMVDRCDTVAKLFALRC
RTLGPRTAHREKDMGIWKAYSWQDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYL
DMGIQGAGAIASGVYTTDSAQQLAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVI
ILDRDGLHDLRHEKCLFLDQLYDQGAAYKIANPTGFEDAVARSRPDDTALLIYTSGTTGL
PKGAMLSHENILATMESGARSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAE
SPETVFDNIQEVSPATFFAVPRVWEKVYSRVLVLAQEATWLGRWAFNRAVAAGAARANYV
LAAKPVPSGIALRYRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISPELLRWYWSIGVPLI
EGYGMTENAGLTAANRVLSHRPGTVGQAVPGVEIRIAPDGEIQLWGLNNFQGYWNKPEKT
AETYTEDGWLRTGDVGQLDDAGFLTITGRIKDIIITAGGKNITPAEIESRLKFSHYISDA
VVIGDRRKFLTCLIMIDQENVEKFAQDRKIPFSDFASLCAAEQVVDLIRGEVDAVNRDFA
RVEQIKDFRLINVLLTAEDDELTATMKLKRGLVEKKHKNLIDQMY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggggataacggtgacacagacagtggtggcggcagatcgcagagcagagcaggatggg
gcaacggccccgttgcctcaggtcgtgctgaacggtgccagctacaacgcgacgcccgga
caacggccggtcatggtggatcgctgcgatacagtggcgaagctctttgcactgcgctgc
cgcacgcttggtccccgcaccgcgcaccgagagaaggacatgggcatctggaaggcctat
tcctggcaggactattgggaccacgctgagaagatcggcctcggcctgatggcgcttggg
ttggagcgcggcgaagttgtctcaatcctcagcgaagatcgcaaggaatggctctacctc
gatatgggtattcagggcgccggggcaattgcctcgggggtctacaccacggattcagcc
cagcaactggcctatctggtcaatgacagcggcagccggtttctggtggtggagaatgac
gaacagctggacaagtttctggagattgaggcggaggttccgcacctgcgctgggtgatc
attctggaccgcgacgggctgcatgatctccggcatgaaaaatgtctgtttctcgatcag
ctctatgatcagggggcagcctataaaatcgccaatccaaccgggtttgaggatgcggtg
gcgcgatctcgaccggatgacactgcgctgctgatctatacctccggcaccacgggtctg
cctaagggcgccatgctgagccatgagaatattctggccacgatggagtcgggcgcgcgg
tcgctggagtgttatgccacggatgaacagctgtgtttcctgccgctgtgccatattctt
gagcgcaacgtctcggtctatctgccgatggcggcgggcagtacggtcaatttcgccgaa
agcccggagacggtctttgacaatattcaggaggtctcgcctgcaaccttctttgcggtg
ccgcgtgtctgggagaaagtctattcccgcgttctggtgctggcgcaggaggcgacctgg
ctgggtcgctgggcctttaaccgggctgtggcggcgggcgcggcgcgggccaactatgtg
ctggccgcgaaacctgtcccgagcggcatcgcgctgcgctaccgtatctgggatctgctg
gtcctgcggaatctgcggcgaatgctggggctggaccggttgcgccggggcggtacgggg
gcggcaccgatctcacctgagttgctgcgctggtactggtcgatcggggtgcctctgatc
gaaggttacgggatgaccgaaaacgcggggctgaccgcagccaatcgggttttgtcgcat
cgtccgggcaccgttggtcaggccgtgccgggcgtcgagatccgcatcgcgccggatggc
gaaattcagctttgggggctgaacaatttccaaggctactggaacaagcctgaaaaaacc
gctgaaacctataccgaggacggctggttgcgcacaggcgacgtcggacagctggatgat
gcaggtttcttaaccatcaccgggcggatcaaggacattatcatcaccgctggtgggaag
aatatcaccccggcggaaatcgagagccggttgaaattcagccactatatttccgatgca
gtggtgattggtgatcggcgtaaattcctgacctgcctgattatgattgatcaggagaac
gtcgagaaatttgcccaggatcgaaaaatcccgtttagtgattttgcctcgctctgtgcg
gcggaacaggtggttgacctgatccggggcgaggtcgatgcggtgaacagggattttgcg
cgcgtcgaacagatcaaggattttcgcctgatcaatgtcctgctgacagctgaggatgac
gagctgaccgcaacgatgaagctgaaacgcgggctggtggagaaaaagcacaagaacctg
attgaccagatgtactga
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