Phaeobacter sp. LSS9: D1820_14670
Help
Entry
D1820_14670 CDS
T05617
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00020
Citrate cycle (TCA cycle)
phq00640
Propanoate metabolism
phq00660
C5-Branched dibasic acid metabolism
phq00720
Other carbon fixation pathways
phq01100
Metabolic pathways
phq01110
Biosynthesis of secondary metabolites
phq01120
Microbial metabolism in diverse environments
phq01200
Carbon metabolism
Module
phq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
D1820_14670
00640 Propanoate metabolism
D1820_14670
00660 C5-Branched dibasic acid metabolism
D1820_14670
09102 Energy metabolism
00720 Other carbon fixation pathways
D1820_14670
Enzymes [BR:
phq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
D1820_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
LEDGF
Motif
Other DBs
NCBI-ProteinID:
AXT36116
LinkDB
All DBs
Position
complement(3069635..3070828)
Genome browser
AA seq
397 aa
AA seq
DB search
MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK
EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL
ALLVDRQTSRISFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE
GAQVKQCVKLMGQLYKAFVEKDMEMLEINPLIVSDTGDLKVLDAKVGFDGNAVYRHADIS
ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG
GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE
GTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKAVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgaatatcaggccaaggccctcctccgcagctacggcgcgccggtttcg
gacgggcgtgtggtgctcaaggcagaagatgccaaaaccgcagcaggtgagctggacggc
ccgctctgggtggtcaaagctcaaatccacgctggtggtcgcggcaaaggctccttcaag
gaggctgacgcgggcgaaaaaggcggcgtgcgcctgaccaaatcggttgaagaagccgct
gacgaagccaagaaaatgctgggccgcaccctcgtgacccatcagaccggccccgccggt
aagcaggtgaaccgcatctacatcgaggcaggctccggcattcagactgaactctacctc
gcgctgctggtggatcgccaaacctcgcgcatctccttcgtctgctccaccgagggcggc
atggacatcgaggaagttgccgaagccacccccgagaaaatcctgtccttctccgttgat
ccggcgactggctatcaggcgttccacggccgccgcatcgctttctcgctcggtcttgaa
ggcgcacaggtcaagcaatgcgtgaagctgatgggtcaactctacaaggcatttgtcgaa
aaagacatggaaatgctggaaatcaacccgctgatcgtctccgacaccggcgatctaaag
gtgctggacgccaaggtcggctttgacggcaacgcggtttaccgccacgctgatatctcc
gaactgcgcgacaccaccgaggaagaccccaaagagctggaagcctccaaatacgatctg
aactacatcgctctggacggtgagatcggctgcatggtgaacggtgcgggtctggcgatg
gccaccatggacatcatcaaactctacggcgctgagcctgccaacttcctcgatgtgggc
ggcggcgccaccaaagagaaagtgaccgaggcgttcaagatcatcacctctgaccccaac
gtcaaaggcatcctggtcaacatcttcggcggcatcatgcgctgcgacgtcatcgccgag
ggcgtggtcgccgcggtgaaagaggtcggcctgaaggtgccgctggttgttcgcctcgaa
ggcaccaatgtggaagccggcaaagacatcatcaacacctccggtcttgatgtcatcgca
gccgacaacctgtccgacggtgctgagaaaatcgtgaaagcggttaaggggtaa
DBGET
integrated database retrieval system
