Phaeobacter sp. LSS9: D1820_14940
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Entry
D1820_14940 CDS
T05617
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00061
Fatty acid biosynthesis
phq00071
Fatty acid degradation
phq01100
Metabolic pathways
phq01212
Fatty acid metabolism
phq02024
Quorum sensing
phq04146
Peroxisome
Module
phq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D1820_14940
00071 Fatty acid degradation
D1820_14940
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D1820_14940
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1820_14940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phq01004
]
D1820_14940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phq04147
]
D1820_14940
Enzymes [BR:
phq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D1820_14940
Lipid biosynthesis proteins [BR:
phq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D1820_14940
Exosome [BR:
phq04147
]
Exosomal proteins
Exosomal proteins of breast milk
D1820_14940
Exosomal proteins of breast cancer cells
D1820_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AXT36167
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All DBs
Position
3122656..3124161
Genome browser
AA seq
501 aa
AA seq
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MTLWHEYLEAHARQRPKAPALGDSGGARWTYGDLARACDALRTHLADLGVGPGDRVMLLC
ENCCAAVAALFATSQLGAVAVPVNARMRAPEVDRILAHAKPVVVLLTAAASPDAAAHASR
LGAQAIEGDFGRLHVVSQDADGRSHVQIPEGLAVLLYTTGTTGAPKGVMLSHDNLNFGGG
ASARLRDMTSEDVVYGVLPLSHVFGLASVLTASVMIGAEVRLETRFTAERFYQALRSGVT
LVSAVPQMHALVMQYAKEQGLDHLGSPDLRYVSSGAAPLDPDWKRRAEAFYGVALQNGYG
MTEATAGICATRNGLGDPDTSVGPPLPGVDLRLDQSVPGGGDGLGEICLRGGNVMLGYFA
NQEATQTVLDPAGWLRSGDIGRLDESGNLHIDGRAKELIIHGGFNVFPPEVEAALNAHPQ
VVQSAVVGRPQGGDEQVVAFVEVAVGDEPTVSELRAFVAEQLAGYKRPGLFILTEQLPAA
PTGKILKHVLLSHFADQLPAV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatggcacgaataccttgaagcgcacgcgcgccaacgccccaaggccccggct
ttgggcgacagtggtggcgcgcgctggacctatggtgatctcgcgcgggcctgcgacgca
ttacggacacatctcgccgacctaggtgtcgggccgggtgatcgggtgatgctgctctgc
gagaattgctgcgccgcagtcgccgcgttgtttgccacatcacagctgggggccgtggcg
gttccggtcaacgcccggatgcgcgcgcctgaggtggatcggatcctcgctcatgccaag
cctgtggtggttctgctgaccgctgcggcctcgcctgacgcggccgcccatgccagccgt
ctcggcgcgcaggctattgaaggcgactttggccgcctgcatgttgtttctcaggatgca
gatggcagatcccacgtgcagatacccgaggggttggcggtactcctttatacgacaggc
accaccggcgctccgaaaggggtgatgctaagccacgacaatctgaatttcggcggcggc
gcctcggcacggttgcgcgatatgaccagcgaggatgtggtctacggtgtgttgcccctt
agccatgtgtttggccttgcgtcggttttaactgcttccgtgatgatcggagccgaggtg
cggcttgagacacggttcacggcggagcgtttttatcaggcgctaagatccggggtcacg
ctggtgtctgcggtgccacagatgcatgcgctggtgatgcaatatgccaaggagcagggg
ctggaccacctcggcagtccggatttgcgctatgtgtcgtccggtgctgcgccgctggat
cccgattggaaacgtcgggccgaggcgttttatggcgttgccttgcaaaacggatacggc
atgaccgaggcaaccgcaggcatctgtgccacacgcaatggtttgggtgaccctgatacg
tcggttggtccaccgctgcccggtgttgatctgcgtctggatcagagcgttccgggtggt
ggcgatgggttgggagagatctgcctgcggggcggcaatgtcatgctgggatatttcgcc
aaccaagaagccacgcaaaccgtccttgatcctgcgggctggttgcgcagcggcgacatc
gggcgtttggacgaaagtggcaacctgcatattgacgggcgtgccaaggaactgatcatc
cacggcggcttcaatgtctttccgccagaagtcgaagcggcgctgaacgcccacccgcag
gtggttcaatccgctgtagtcggtcgcccgcagggcggagatgagcaggtggttgccttt
gtcgaggtggcggttggggatgagccaacggtgagtgaattgcgtgccttcgtggcggag
cagcttgcaggctataaacggcccggtctcttcatcctgacggagcagctgccagccgca
ccgacagggaagatactgaagcacgtgttgctgtcacattttgcggatcaactgcccgcc
gtatga
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