KEGG   Phaeobacter sp. LSS9: D1820_16130
Entry
D1820_16130       CDS       T05617                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
phq  Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:phq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phq03400]
    D1820_16130
Enzymes [BR:phq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D1820_16130
    5.6.2.6  RNA 3'-5' helicase
     D1820_16130
DNA repair and recombination proteins [BR:phq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D1820_16130
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII DEXQc_Suv3 Cas3-like_C_2
Other DBs
NCBI-ProteinID: AXT36384
LinkDB
Position
complement(3391091..3393526)
AA seq 811 aa
MSRLPDVITDWFSTRGWTIHPHQQEMLDRAEDPATLLIAPTGGGKTMAGFLPTLADLATG
DHQGLHTLYVSPLKALAADIKRNLRTPVDDIGLPIRIDDRTGDTPASRKRSQRADPPHIL
LTTPESLALLTSYEDAPRMFAGLKRVVLDEIHALADSKRGDQLMLALTRLQAICPDMRRV
GLSATVDDPAAIAQYLARHPDPCDIVLADPGPAPDIRMLHTDAAPPWAGGGAAHAIPAVL
EQIKAHKTTLIFHNTRAQAEIFFRNLWLANEDGLPIGIHHGSLDRVQRDRVEAAMVRGEL
RAVVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECRAALEAVEAGTLDGTPRHPGPRDVLCQHILIRACAGPFAADDLFAEVTGAGAYASLT
RAEFDACLDFCATGGYALRVYDQWQRLLQRPDGLWQLRDPRAARRIRMNIGTIQDADLLK
VRLKRSRGGKPLGEIEEAFAATLTPGDTFLIGGQVVRYEGLREMTVEVSRNASKTPKVAV
FSGTKFATSTQLSTRILDILQRDSWPDLPSHTADWLALQRQVSEMPRQGQLLLESFPFRG
REYLCVYGFAGRNAMQTLGLLLTKRMEELSLDPLGFVATDYATLIWGLSPVDDPAPLFDP
DKLRAGLDGWLADNAVMKRSFRAVANIAGLIERNTPGQRKNGRQATFSSDILYDTLRKYD
PDHLLLDITRQEALGGLVDFGRIEEMLARTKGRITLNRLSRISPLAAPLLLEVGKVPVKG
AAQEKLLQRETEELMRSAGLAELTPPQEPGL
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagcaggcttcccgatgttatcacagattggttcagcacccgtggctggaccatccat
ccccatcagcaggagatgctggaccgtgccgaagatccggccaccctgctgattgccccc
accggcggcggcaagaccatggccggcttcctgccgacgctggctgatctggcaacaggc
gaccatcaggggctgcacacgctctatgtctcaccgctgaaggcgctggcggcagatatc
aaacgcaacctgcgcaccccggttgacgacatcggcctgcccatccgcattgatgaccgc
acgggtgatacccccgccagccgcaagcgcagccagcgcgccgatccaccgcatattctt
ctcaccacaccggaaagcctcgccctgctcacctcttacgaggacgcgccgcgcatgttt
gccgggctgaaacgggtggtgctggatgaaatccacgccctcgccgacagcaaacgcggt
gaccagctgatgctcgccctgacccggctgcaagccatatgccccgacatgcgccgagtc
ggcctttccgccaccgtcgatgatcccgccgccatcgcgcagtacctcgcgcgccatccc
gacccctgtgatatcgtcctggccgatcccggccccgcccccgacatccggatgctgcac
acagacgcggccccaccctgggccggtggcggtgctgcccatgccatccccgccgtgctg
gagcagatcaaggcccataagaccacgctcatcttccacaacacccgcgcccaggccgag
atcttctttcgcaacctctggctcgccaatgaggacggcctgccgattggcatccaccac
ggctcgcttgatcgggtgcagcgcgaccgggtagaggcggcgatggtccggggagagctg
cgcgccgtggtctgcaccggctcgcttgatctgggcatcgactggggcgacgtggatctg
gtgatccagatcggcgcgccaaaaaacgtcaagcgactggtgcagcgcatcggccgcgcc
aaccaccgctacaacgcgccgtccaaggcgctactggtgcctgccaaccggtttgaggtg
gtggaatgccgcgccgcccttgaggcggttgaggctggcacgctggacggcacgccacgc
catcccggcccccgcgacgtcctctgccagcacatcctgatccgcgcctgcgccgggccc
tttgctgccgatgatctgtttgctgaggtcaccggcgctggcgcctatgccagcctcacc
cgcgcagagtttgacgcctgcctcgacttctgcgccaccggtggctacgcgcttcgggtc
tatgaccaatggcagcggctgctgcagcgccccgacgggctgtggcagctgcgcgacccc
cgcgccgcccgccgtatccgcatgaatatcggcaccattcaggacgcggacctcctgaaa
gtcaggctcaaacgcagccgtggcggcaaacctctgggggagattgaggaagcctttgcc
gcgaccctcacccccggagatacttttctcattggcgggcaggttgtgcgctatgagggg
ttgcgcgaaatgacggtggaggtcagtcgcaacgccagcaagacacccaaggtcgctgtg
ttctccggcaccaaatttgccacctcaacccagctcagcacccgcattctggacattctg
caacgcgacagctggccggatctgccgtcccataccgccgactggctggcgttgcagcgt
caggtctctgaaatgccgcgccagggccagctgctgctggagagctttcccttccggggg
cgcgaatatctctgcgtctatggctttgccgggcgcaacgcgatgcagaccctcggtctg
ttgctaaccaagcgcatggaggagctgtcgctcgacccactgggctttgtcgccacggat
tatgccacgctgatctggggactcagcccggttgacgaccccgccccgctgttcgacccg
gacaaactgcgcgccggtctcgatggctggctggcggacaacgcggtgatgaaacgcagc
tttcgcgcggtggccaatatcgcaggcctcatcgaacgcaacacccccggccagcgcaaa
aacggccgtcaggcgacgttttcctccgacatcctctacgacaccctgcgcaaatatgat
cccgatcacctgcttctggacatcacacggcaggaggcgcttggcggcttggtggacttc
ggccgcattgaggagatgctggcgcgcaccaagggccgcatcaccctcaaccgcctgtcg
cggatctcccccctcgcagcccccctgctgcttgaggtcggcaaggtcccggtaaaaggc
gcggcacaggaaaaactgctgcaacgcgagaccgaggaactgatgcggagtgccgggctg
gccgagctgacgccgccgcaggaacctggcctctga

DBGET integrated database retrieval system