Phaeobacter sp. LSS9: D1820_16545
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Entry
D1820_16545 CDS
T05617
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D1820_16545
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phq01007
]
D1820_16545
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phq03016
]
D1820_16545
Enzymes [BR:
phq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
D1820_16545
Amino acid related enzymes [BR:
phq01007
]
Aminoacyl-tRNA synthetase
Class II (U)
D1820_16545
Transfer RNA biogenesis [BR:
phq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D1820_16545
Prokaryotic type
D1820_16545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AXT36459
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All DBs
Position
3480103..3482499
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AA seq
798 aa
AA seq
DB search
MKFTLSWLKDHLETDASVEEITETLTDLGLEVEGVSNPADRLKDFTLGYVKHAEKHPDAD
KLRVCKVDTDEGEMQIICGAPNAREGITVVVCKPGMYIPGLDITIGVGKIRGVESFGMMA
SERELELSDEHDGIIELPSGEVGDRFVDWLAQNAPAKVDPVIEIAITPNRPDALGVRGIA
RDLAARGLGTLKPLTIEPVEGGYDSPIKVAIAEDTLDGCPLFTGRLIRGVKNGPSPQWLQ
DRLSAIGLRPISTLVDITNYFTFDQNRPLHVFDAAKVAGNLRVHRAAGDETLTALDEKDY
TLSEGQMVISDDNGAESIAGIMGGAATGCTEETTDVFLESAFWDHVQIATTGRALKINSD
ARYRFERGVDPEYTRDGLDHATRMILDLCGGEPSNVVTAGAVPDHARAYKLDPERVQSLV
GMDIPESEQRQTLTRLGFRLEGNMAHVPSWRPDVMGEADLVEEVARIASLTKLEGKPLPR
LTDGVPAPVMTPQQRRQQIARRTCASLGYNEVVSYTFIDKASAALFGGGDDATMLANPIS
SEMSHMRPALLPGLLQAAARNQARGFMDLALFEAGPAFHGGEPGEQHNLISGLLVGRTGP
KDVHGASRAVDTFDAKADIEAVLAAIGAPAKVQILRGAQSWWHPGRHGKICLGPKKVLGV
FGELHPKVLSEMGIKGSAVAFTIWPDEVPMPRKSGANRGALVQSDLQAVERDFAFVVADD
VEALTLVNAAAGADKVLIDDVRVFDEFIGGSLGEGSKSLAITVRLQPTDKTLTEKDIEAV
SAKIVAKVTKATGGTLRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcactctttcttggctgaaagaccacctcgagaccgacgcatcggtcgaggag
atcacagaaaccctgaccgatcttggtcttgaggtggagggcgtgtccaatcccgccgac
cggctcaaggactttaccctgggctatgtgaaacatgctgagaaacaccccgatgcggac
aagctgcgggtgtgtaaggtcgacactgacgaaggcgagatgcagatcatctgcggcgcg
ccgaacgcacgcgagggcatcaccgtggtggtgtgtaaaccgggcatgtatattccgggc
ctggatatcaccatcggtgttggcaagatccgcggtgtcgagagctttggcatgatggcc
tccgagcgggagctggagctgtcggatgagcatgacggtattatcgaactgccctcggga
gaggttggggaccggtttgttgactggttggcacagaatgctccggccaaggtcgatccg
gttatcgaaattgccatcactccgaaccgcccggatgcattgggtgtgcgcggcatcgcc
cgcgatctggccgcgcgcggtctgggcacgctgaaaccgctcacgattgaaccggttgag
ggcggttatgacagcccgatcaaggtggcgatcgccgaggatacattggacggatgcccg
ctgttcaccggccgcctgatccggggcgtgaagaacggcccaagcccgcagtggctgcag
gaccggctgagcgccatcggcctgcgcccgatctcgaccttggtggatatcaccaactac
ttcaccttcgatcagaaccgtccactgcatgtgtttgatgcagcaaaagtggctggcaat
ctgcgggttcaccgcgccgcaggtgacgagacgctgacggcgctggatgagaaggattac
accctctccgagggtcagatggtaatttctgatgacaatggcgcagaaagcattgccggt
atcatgggcggggctgcgacgggctgcaccgaggaaaccacagatgtatttctggagagt
gctttctgggaccatgttcagatcgcgaccaccggccgtgcgctcaagatcaactctgac
gcgcgctatcggtttgagcggggcgttgaccctgaatacacgcgtgatgggctggatcat
gccacccggatgatccttgatctctgcggtggtgaaccgtcgaatgtggtgaccgccggc
gccgtgccagaccatgcgcgggcttataagctggatcccgagcgggttcagtcgctggtc
ggcatggatatcccggaatccgaacaacgccagacattgacgcggctcggcttccgcctg
gaaggcaatatggcccatgttcccagctggcgccccgatgtgatgggggaggccgatctg
gttgaggaagtggcgcggatcgcctctttgacaaagctggaaggcaagcctttgccgcgg
ctcaccgatggtgtgcccgcgccggtgatgacaccccaacaacgtcgccagcagatcgcg
cgccggacctgtgccagcctcggctacaatgaggtggtgagctacacgttcatcgacaag
gcctctgcggcgctgttcggcggtggcgatgatgccaccatgctggccaatccgatctcg
tccgagatgtcgcatatgcgtcctgcgctgctcccgggtcttttgcaggctgcggcgcgc
aatcaggcgcggggcttcatggatctggcgttgttcgaggcaggtcctgcgttccacggc
ggcgagccgggtgagcagcataacctgatttctggcctgctggttggacggaccggtccc
aaggatgtgcacggtgccagccgcgcggtcgacacctttgatgccaaggctgatatcgaa
gcggttctggcggcgatcggcgcccctgccaaggtacagatcctgcgcggggcacagtct
tggtggcatccgggacggcatggcaagatctgtctcggcccgaagaaggtactgggtgtc
tttggtgaactgcaccccaaggtgctgagcgaaatgggcatcaaagggtccgctgttgcg
tttaccatctggcccgatgaggtgccgatgccgcgcaaatccggcgccaaccggggtgca
ttggtccaaagcgatctgcaggcggtggagcgtgactttgcttttgtcgtggcggatgat
gtcgaggcgctaaccctggtcaacgcagcggctggcgcggataaggtcctgattgacgat
gtgcgtgtgttcgacgaattcatcggtggcagtctgggggagggcagcaaatcgctggcc
atcaccgtgcggttgcaaccgaccgacaagaccctgaccgaaaaggacatcgaagcggtc
agcgccaagatcgtggccaaggtcacaaaggcgaccggcggcacattgcgcggataa
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