Phaeobacter sp. LSS9: D1820_18760
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Entry
D1820_18760 CDS
T05617
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00260
Glycine, serine and threonine metabolism
phq00630
Glyoxylate and dicarboxylate metabolism
phq00670
One carbon pool by folate
phq00785
Lipoic acid metabolism
phq01100
Metabolic pathways
phq01110
Biosynthesis of secondary metabolites
phq01200
Carbon metabolism
Module
phq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D1820_18760 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D1820_18760 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
D1820_18760 (gcvP)
00670 One carbon pool by folate
D1820_18760 (gcvP)
Enzymes [BR:
phq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
D1820_18760 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF489
Motif
Other DBs
NCBI-ProteinID:
AXT37138
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Position
unnamed3:59201..62056
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AA seq
951 aa
AA seq
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MAFKLTDYEAYDFANRRHIGPSPREMADMLKVIGFNTLDELIDATVPPAIRQKEALDWGP
AMTERDALFHMKEIAGKNKVLTSLIGQGYHGTTTPAPILRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLPVANASLLDEATAAAEAMAMAHRGSRSKANNAAFFVDKNC
HPQTVAVIKTRAEPLGIDVVVAEPAELDAGAVFGAIFQYPGTHGHVTDFSDQIAALHEHK
GIAVVAADILSLALLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMATSDKLKRSMPGR
IIGVSIDARGNKAYRLSLQTREQHIRREKANSNVCTAQALLAVIASMYAVYHGPDGIKAI
AQSVHRKTARLAAGLEEAGFKVEPEVFFDTITVEVGHLQKTVMEAAVQRGINLRRVGETK
VGISLDEQTRPETIEAVWGAFGIDRKDDSSNKQYRLPEAMLRDSAYLTHPIFHKNRAEAE
ITRYMRRLADRDLALDRAMIPLGSCTMKLNATIEMIPVTWPEFSNLHPFVPEDQAQGYHQ
MIDDLNDKLCQITGYDAISQQPNSGAQGEYAGLLTIRNYHASRGQAHRNVCLIPTSAHGT
NPASAQMVGWKVVPIKADDNGNIDVADFREKAEKHSDHLAGCMITYPSTHGVFETTVQEV
CQITHDHGGQVYIDGANMNAMVGVSRPGDIGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
AHLTEHLPGHPEYGTAVGPVSAAPFGSPSILPVSWAYILLMGGAGLTQATKVAILNANYI
AARLQDAYPILYTSESGRVAHECILDTRPLNDDGGVTVDDVAKRLIDSGFHAPTMSWPVA
GTLMVEPTESEPKDELDRFCEAMLSIRSEAQDIIDGKIDAENNPLKHAPHTVRDLVGEWD
RPYSREQACFPPGNLGVDKYWPAVNRVDNAYGDRNLICTCPPMEDYAEAAE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaaactgactgattacgaagcctacgactttgccaatcgccgccatatcggg
cccagcccgcgtgaaatggccgatatgctgaaggtgatcggcttcaacaccctcgatgag
ctgatcgacgccaccgtgccgcccgccatccgccagaaagaggcgctggactggggcccg
gcgatgaccgaacgcgatgcgctcttccacatgaaagagatcgcgggcaagaacaaggtg
ctgacctccctgatcggtcagggctaccacggcaccaccacgcccgcgccgatcctgcgc
aatattctggaaaacccggcctggtacacggcttacacgccctatcagcccgagatttcg
cagggccgtcttgaggcgctgttgaacttccagaccatggtcagcgatctgactggcctg
ccggtggccaacgcctcgctgctcgacgaagccactgccgccgccgaagccatggcgatg
gcgcatcgcggttcgcgctccaaggcgaataacgcggccttcttcgtggataagaactgc
cacccgcagaccgtcgccgtgatcaagacccgcgccgagcctctgggcatcgatgttgtg
gttgccgaaccggcagagctggatgcgggcgccgtctttggcgcgatcttccagtatccc
ggcacccatggtcacgtcaccgacttcagcgaccagatcgccgccctgcacgagcacaag
ggcatcgcggttgtggccgccgacatcctgtcgctggcgctgctgaaatcccccggtgaa
atgggcgcggatatcgccatcggctccacccagcgtttcggtgttccgatgggctacggc
ggcccgcacgctgcttatatggcgacctcggacaagctgaaacgctccatgccgggccgg
atcatcggtgtgtccatcgatgcgcgcggcaacaaggcctaccgcctgtcgctgcagacc
cgcgaacagcacatccgtcgcgagaaagccaactccaacgtctgtaccgcacaggcgctg
ctggcggtgatcgcatcgatgtatgccgtctaccacggtcccgatggcatcaaggcgatt
gcccagtccgtacaccgcaagactgcgcgtctggcggctggtctggaagaggccgggttc
aaggttgaaccggaagtgttctttgacaccatcaccgtcgaagttggccacctgcagaaa
accgtcatggaagccgccgttcagcggggcatcaacctgcgccgcgtcggcgaaaccaag
gtcggtatctcgctggacgaacagacccgccccgaaaccatcgaggccgtctggggtgcc
tttggcatcgatcgcaaggacgacagctccaacaagcagtaccgtctgcccgaagccatg
ctgcgcgacagcgcgtatctcacgcacccgatcttccacaagaaccgggccgaggcagag
atcacacgctacatgcgccgtctggccgaccgcgatctggcgctggaccgcgcgatgatc
ccgcttggctcctgcaccatgaagctgaacgcaaccatcgagatgatcccggtcacctgg
ccggaattcagcaacctgcaccccttcgttcctgaagatcaggcgcagggttaccaccag
atgatcgacgatctgaacgacaagctgtgccagatcaccggctatgacgcgatttcccag
cagccgaactccggtgcgcagggcgaatacgcgggcctgttgacgatccgcaactaccac
gcatcgcgtggccaggcgcatcgcaacgtctgcctgatcccgacctctgcccatggcacc
aacccggcctccgcacagatggtgggctggaaagtggttccgatcaaagcggacgacaac
ggcaacatcgacgtcgcggacttccgtgaaaaggcagagaaacactctgaccacctcgcg
ggctgcatgatcacctacccgtccacccatggcgtgttcgagaccaccgttcaggaggtc
tgccagatcacccatgatcacggcggccaggtctatatcgatggcgccaacatgaacgcg
atggtgggtgtgtcccgtccgggtgatattggcggtgacgtcagccacctgaacctgcac
aagaccttctgcattccgcatggtggtggtggccccggcatgggtccgatcggcgtcaag
gcgcatctgaccgaacacctgccgggtcacccggaatacggcacggctgtgggtccggtt
tcggcagcgcccttcggctcgccctcgatcctgccggtcagctgggcgtatatcctgctg
atgggtggtgcgggcctgacccaggcgaccaaggtggcgatcctcaacgccaactatatc
gctgcgcgtctgcaggatgcctatccgatcctctacacctccgaatccggtcgtgtggcg
catgagtgcattctggacacccgtccgctgaatgacgacggcggcgtgaccgtggacgat
gtggccaagcgcctgatcgacagcgggttccacgcgccgaccatgtcctggccggtggca
ggtaccctgatggtggagccgacggaatccgaacccaaggatgagctggaccgcttctgc
gaagcaatgctgtccatccggtcggaagcgcaggatatcatcgacggtaagatcgatgcc
gaaaacaacccgctgaagcacgcaccacatacggtgcgcgatctggttggtgagtgggat
cgcccctactcgcgcgagcaggcctgcttccctccgggcaacctcggtgttgataaatac
tggccggcggtgaaccgcgtcgacaacgcctatggcgaccgcaacctgatctgcacctgc
cctccgatggaggattacgcagaggcggctgaataa
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