Phreatobacter cathodiphilus: C6569_00805
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Entry
C6569_00805 CDS
T05356
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00300
Lysine biosynthesis
phr00470
D-Amino acid metabolism
phr01100
Metabolic pathways
phr01110
Biosynthesis of secondary metabolites
phr01120
Microbial metabolism in diverse environments
phr01230
Biosynthesis of amino acids
Module
phr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C6569_00805
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C6569_00805
Enzymes [BR:
phr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C6569_00805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVO43728
UniProt:
A0A2S0N6F3
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All DBs
Position
165312..166598
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AA seq
428 aa
AA seq
DB search
MAPEASLTDRLVAGQFGTEGSDLLIGGIPARVLAERFGTPLFAYDAALIRASYRALAAAI
EGFAGIHYSIKANPNPAVVRVLHEEGAGIEIASLGEFRAARTAGVDPAHMLFAGPGKRRA
ELEAVIGAGIGEIHLESREEMAHAAAIGAALGRRVAVAIRVNPVAEAQGGAMRMGGKAAP
FGFDEEDLEAVVDAVAASPHLDLTGVHFFAGTQILDAAVLLGQWRHGLAVASRAAARLGR
PLRTIDLGGGLGIPYFAGDGTLDLAAVKAGLPDLVALKAADPLIRNAHVLVEPGRYLVGA
SGVYLAAVLSAKLSRGQRFLVVDGGMHHHLAASGNLGQVIKRDYPVVAASRVGEPSAGPA
SVVGPLCTPLDTLARKVEMPAMAEGDLVAVLQSGAYGPTASPVGFLSHPAAAEVLVDGGE
ARLISQAQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgaggcgagcctcaccgaccgcctcgtcgccggccagttcggcaccgaaggc
tccgatctcctcatcggcggcatcccggcgcgcgtcctagccgagcggttcggcacgccg
ctcttcgcctatgacgcggcgctgatccgcgcctcttaccgcgctctcgccgccgcgatc
gaaggctttgccggcatccactattccatcaaggcgaaccccaaccccgccgtggtgcgc
gtgctccacgaggagggcgccggcatcgagatcgcctccctcggcgagttccgcgccgcg
cgcacggccggcgtcgacccggcacacatgctcttcgccggccccggcaagcgccgcgcc
gaactggaggcagtgatcggggccggcatcggcgagattcacctggagagccgcgaggag
atggcccatgccgcggccatcggcgccgccctcggacggcgcgtcgccgtcgccatccgc
gtcaatcccgtcgccgaggcccagggcggggccatgcgcatgggcggcaaggcggcgccc
ttcggcttcgacgaggaggatctcgaggcggtggtcgacgccgtcgcggcctcgccccat
ctggacctcaccggggtccacttcttcgccggcacccagatcctcgacgccgccgtgctg
ctcgggcaatggcgccacggcctcgccgtcgcctcccgcgccgcggcgcgcctcgggcgc
ccgctgcgcaccatcgatctcggcggcggcctcggcatcccctatttcgccggtgacggc
accctcgacctcgcggcggtgaaggcgggcctgcccgacctcgtcgcgctgaaggccgcc
gaccccctcatccgcaacgcccatgtgctggtggagcccggccgctatctcgtcggggcg
agcggcgtctatctcgccgcagtgctctcggccaagctctcgcggggccagcgcttcctc
gtcgtcgacggcggcatgcaccaccatctcgcggcttccggcaatctcggccaggtgatc
aagcgcgactatccggtggtcgccgcctcgcgcgtgggcgagccctccgccggccccgcc
agcgtcgtcgggccgctgtgcacgccgctcgacacgctggcgcgcaaggtcgagatgccg
gcgatggccgagggcgatctcgtcgccgtgctgcaatcgggcgcctatggcccgaccgcc
agtcccgtcggcttcctcagccatcccgccgccgccgaggtgctggtggacggcggcgag
gcgcggctgatctcacaggctcagtag
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