KEGG   Phreatobacter cathodiphilus: C6569_00805
Entry
C6569_00805       CDS       T05356                                 
Name
(GenBank) type III PLP-dependent enzyme
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
phr  Phreatobacter cathodiphilus
Pathway
phr00300  Lysine biosynthesis
phr00470  D-Amino acid metabolism
phr01100  Metabolic pathways
phr01110  Biosynthesis of secondary metabolites
phr01120  Microbial metabolism in diverse environments
phr01230  Biosynthesis of amino acids
Module
phr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:phr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C6569_00805
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C6569_00805
Enzymes [BR:phr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     C6569_00805
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AVO43728
UniProt: A0A2S0N6F3
LinkDB
Position
165312..166598
AA seq 428 aa
MAPEASLTDRLVAGQFGTEGSDLLIGGIPARVLAERFGTPLFAYDAALIRASYRALAAAI
EGFAGIHYSIKANPNPAVVRVLHEEGAGIEIASLGEFRAARTAGVDPAHMLFAGPGKRRA
ELEAVIGAGIGEIHLESREEMAHAAAIGAALGRRVAVAIRVNPVAEAQGGAMRMGGKAAP
FGFDEEDLEAVVDAVAASPHLDLTGVHFFAGTQILDAAVLLGQWRHGLAVASRAAARLGR
PLRTIDLGGGLGIPYFAGDGTLDLAAVKAGLPDLVALKAADPLIRNAHVLVEPGRYLVGA
SGVYLAAVLSAKLSRGQRFLVVDGGMHHHLAASGNLGQVIKRDYPVVAASRVGEPSAGPA
SVVGPLCTPLDTLARKVEMPAMAEGDLVAVLQSGAYGPTASPVGFLSHPAAAEVLVDGGE
ARLISQAQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcgcctgaggcgagcctcaccgaccgcctcgtcgccggccagttcggcaccgaaggc
tccgatctcctcatcggcggcatcccggcgcgcgtcctagccgagcggttcggcacgccg
ctcttcgcctatgacgcggcgctgatccgcgcctcttaccgcgctctcgccgccgcgatc
gaaggctttgccggcatccactattccatcaaggcgaaccccaaccccgccgtggtgcgc
gtgctccacgaggagggcgccggcatcgagatcgcctccctcggcgagttccgcgccgcg
cgcacggccggcgtcgacccggcacacatgctcttcgccggccccggcaagcgccgcgcc
gaactggaggcagtgatcggggccggcatcggcgagattcacctggagagccgcgaggag
atggcccatgccgcggccatcggcgccgccctcggacggcgcgtcgccgtcgccatccgc
gtcaatcccgtcgccgaggcccagggcggggccatgcgcatgggcggcaaggcggcgccc
ttcggcttcgacgaggaggatctcgaggcggtggtcgacgccgtcgcggcctcgccccat
ctggacctcaccggggtccacttcttcgccggcacccagatcctcgacgccgccgtgctg
ctcgggcaatggcgccacggcctcgccgtcgcctcccgcgccgcggcgcgcctcgggcgc
ccgctgcgcaccatcgatctcggcggcggcctcggcatcccctatttcgccggtgacggc
accctcgacctcgcggcggtgaaggcgggcctgcccgacctcgtcgcgctgaaggccgcc
gaccccctcatccgcaacgcccatgtgctggtggagcccggccgctatctcgtcggggcg
agcggcgtctatctcgccgcagtgctctcggccaagctctcgcggggccagcgcttcctc
gtcgtcgacggcggcatgcaccaccatctcgcggcttccggcaatctcggccaggtgatc
aagcgcgactatccggtggtcgccgcctcgcgcgtgggcgagccctccgccggccccgcc
agcgtcgtcgggccgctgtgcacgccgctcgacacgctggcgcgcaaggtcgagatgccg
gcgatggccgagggcgatctcgtcgccgtgctgcaatcgggcgcctatggcccgaccgcc
agtcccgtcggcttcctcagccatcccgccgccgccgaggtgctggtggacggcggcgag
gcgcggctgatctcacaggctcagtag

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