Phreatobacter cathodiphilus: C6569_03600
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Entry
C6569_03600 CDS
T05356
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phr03032
]
C6569_03600
03036 Chromosome and associated proteins [BR:
phr03036
]
C6569_03600
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_03600
DNA replication proteins [BR:
phr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C6569_03600
Chromosome and associated proteins [BR:
phr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C6569_03600
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C6569_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
XPC-binding
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AVO44227
UniProt:
A0A2S0N887
LinkDB
All DBs
Position
complement(728203..728487)
Genome browser
AA seq
94 aa
AA seq
DB search
MIKSELVQKIAEQNPQLYQRDVENIVNAILDEIVGALARGDRVELRGFGAFSVKARSARV
GRNPRTGEHVEVEDKVVPFFKTGKEMRERLNKGA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtccgaacttgtgcagaagatcgccgagcagaacccccagctctaccagcgc
gacgtcgagaacatcgtcaacgcgatcctcgacgagatcgtcggggccctcgcccgtggc
gaccgggtcgagttgcgcggcttcggcgccttctcggtgaaggcgcgcagcgcccgcgtc
ggccgcaacccgcgcaccggagagcatgtcgaggtcgaggacaaggtcgtgccgttcttc
aagaccggcaaggagatgcgtgagcgtctgaacaagggcgcctga
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