Phreatobacter cathodiphilus: C6569_04940
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Entry
C6569_04940 CDS
T05356
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phr03032
]
C6569_04940
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_04940
Enzymes [BR:
phr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C6569_04940
DNA replication proteins [BR:
phr03032
]
Prokaryotic type
DNA Topoisomerases
C6569_04940
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6569_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Arm-DNA-bind_4
Htt_C-HEAT
Motif
Other DBs
NCBI-ProteinID:
AVO44460
UniProt:
A0A2S0N8F9
LinkDB
All DBs
Position
complement(1030952..1032052)
Genome browser
AA seq
366 aa
AA seq
DB search
MDLVFADLSAPGITRHRHGKGFSYRDGTGRRLTEAATLQRVRALVIPPAWRDVWICTDPA
GHIQAVGRDEKGRRQYIYHPGFRAEREAEKFEKLVSFAQILPRLRRRVAADMALPGLERD
KVLATVVYLLDRTLIRIGNETYARDNGSFGLSTLRSGHVAVAGSTIRFTFKGKSGKEWRL
AIFDKRVSRIVRTCQHLPGQHLFQYRDRDGDLRAVSSDEVNDYLRRAAGGPVSAKDFRTW
AGTVLCGLALSLAPPPPNERQLRKQLASAVRAVSQRLGNTPAVCRSSYIHPKIFTAHTEG
LLARYARRMSHALAPEGKLTPAERAVLKILTGTVDQKRAEASGGAPRPGKAGAGEARPQE
LTAQAA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgtcttcgccgacctctccgccccgggcatcacccgccatcggcacggcaag
ggcttctcctacagggacggaacaggacggcgcctcaccgaggccgcaacgctgcagcgg
gtcagggcgttggtgatcccgccggcatggcgggacgtgtggatctgcaccgatcccgcc
ggccacatccaggcggtcggccgcgacgagaagggccggcggcagtacatctatcatccc
gggttccgcgccgagcgcgaggcggagaagttcgaaaagctcgtctccttcgcgcagatc
ctgccgcggctgcgccggcgggtggcggccgacatggcgctgccggggctcgagcgcgac
aaggtgcttgcgacggtggtctatctcctcgaccgcacgctcatccgcatcggcaacgag
acctatgcccgcgacaacggcagcttcggcctgtcgacgctgcgcagtggccatgtggcg
gtggcgggctcgaccatccgcttcaccttcaagggcaagagcggcaaggagtggcgcctg
gcgatcttcgacaagcgggtgagccggatcgtccgcacctgccaacacctgccgggccag
cacctgttccagtatcgcgacagggacggggatctgcgggccgtctcctccgacgaggtc
aacgactatctgcgccgcgccgccggcgggccggtcagcgccaaggacttccgcacctgg
gcgggcacggttctctgcggcctcgccctgtcgctggcccctcccccgccgaacgagcgg
cagttgcgcaagcagttggcgagtgcggtcagggcggtgtcgcagcgcctcggaaacacg
cccgccgtctgccgctcctcctacatccacccgaagatcttcaccgcccataccgagggc
ctgctggcccgctatgcccgccgcatgtcccatgcgctcgcccccgagggcaagctgacg
ccagcggagcgggcggtcctgaagatcctgacggggacggtcgaccagaagcgggccgag
gcttccggcggcgcgccgaggcccggcaaggcgggggccggcgaggcccggccgcaggag
ctgacggcgcaggccgcctga
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