Phreatobacter cathodiphilus: C6569_05510
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Entry
C6569_05510 CDS
T05356
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6569_05510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phr03021
]
C6569_05510
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_05510
Enzymes [BR:
phr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6569_05510
Transcription machinery [BR:
phr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6569_05510
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6569_05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AVO44559
UniProt:
A0A2S0N8R7
LinkDB
All DBs
Position
1141435..1141824
Genome browser
AA seq
129 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLVASHRARMLAAGSPITIDRDRDKNPVVALREIADATVSP
DDLREDLIHSLQKYVEVDEPEPDMVPMIAAPGATADDADVAMDRMSEEDLLRGLEGLKPP
EDTDDDDGL
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcaccgtcgaggattgcatcgacaaggtcgataaccgcttcgagctcgtg
ctcgtcgccagccaccgcgcgcgcatgctcgccgccggctcgccgatcaccatcgaccgc
gaccgcgacaagaaccccgtcgtcgccctgcgcgagatcgccgacgctaccgtctcgccc
gacgacctgcgcgaggacctgatccactcgctgcagaagtatgtcgaggtggacgagccc
gagccggacatggtgccgatgatcgccgcccccggcgccaccgccgacgacgccgacgtc
gccatggaccgcatgagcgaggaagacctgctgcgcggcctggaaggcctgaagccgccg
gaggacaccgacgacgacgacggcctctga
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