Phreatobacter cathodiphilus: C6569_07450
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Entry
C6569_07450 CDS
T05356
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00061
Fatty acid biosynthesis
phr00071
Fatty acid degradation
phr01100
Metabolic pathways
phr01212
Fatty acid metabolism
phr02024
Quorum sensing
phr04146
Peroxisome
Module
phr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C6569_07450 (pimA)
00071 Fatty acid degradation
C6569_07450 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C6569_07450 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6569_07450 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phr01004
]
C6569_07450 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phr04147
]
C6569_07450 (pimA)
Enzymes [BR:
phr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C6569_07450 (pimA)
Lipid biosynthesis proteins [BR:
phr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C6569_07450 (pimA)
Exosome [BR:
phr04147
]
Exosomal proteins
Exosomal proteins of breast milk
C6569_07450 (pimA)
Exosomal proteins of breast cancer cells
C6569_07450 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVO44912
UniProt:
A0A2S0N9U6
LinkDB
All DBs
Position
complement(1526214..1527869)
Genome browser
AA seq
551 aa
AA seq
DB search
MAARPFAWEKSYPAGVRWDAPIKITTLGRLIDEATSTFAERPVFEFRDRLISYRELGERV
YQFGAALVRAGLGRADTVALYLPNMPTHPISFFGAAKAGIRLVHLSPLDAERVLAYKLKD
AGARTLVTSNIAPLFGMALKLHEQGLVDRLIVAEDAAFGESGLPTLPIPDRPGIVTFADF
VAGAEPPAAWPAVDPEDVALLQYTGGTTGMPKGAMLSHKNITAAVSIYDAWQPALPSGDP
AKDKIILVLPLFHIYALTSVMLRQITRGSCMLLRMRFDPDQTFDDFEKRRATIFPGVPTM
WIALVNHPRFATADLSSLIYAASGGAPLPVEIARRFEQRAGFRLTGGWGMTETSPSGTNV
PNTGVSKPGTIGLPLPGLEMDICALDDPHAVLPPREIGEIRIRGPNVTTGYWNKPEETKA
SYADGWFLTGDIGYMDEDGFFFIVDRKKDMIISGGFNVYPQMIEQAIYEHPAVAEVIVLG
VPDSYRGEAAKAFVTLRADAKPFTLEELQVFLKDKVGRHEMPQALEFRDSLPKTTVGKLS
RAELRNEIRAG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaggcccttcgcttgggaaaaatcctatccggccggcgtccgctgggatgcg
ccgatcaagatcaccaccctcgggcgcctgatcgacgaggcgacctcgaccttcgccgag
cgcccggtcttcgagttccgggacaggctgatcagctaccgcgagctcggcgagcgggtg
taccagttcggcgcggcgctggtgcgcgccggtctcggccgagccgacaccgtcgccctc
tacctgccgaacatgccgacccatccgatcagcttcttcggcgcggccaaggccggcatc
cggctggtccatctctcgccgctcgatgccgagcgcgtcctcgcctacaagctgaaggat
gccggcgcgcgcacgctcgtcacctccaacatcgcgccgctcttcggcatggcgctgaag
ctccacgaacagggcctggtggaccggctcatcgtggcggaggacgccgccttcggcgag
tccggcctgccgaccctgcccattccggacaggccgggcatcgtcaccttcgccgatttc
gtcgccggtgccgagccgccggcggcctggcccgcggtcgaccccgaggacgtcgccctg
ctgcaatataccggcggcacgacgggcatgccgaagggcgccatgctcagccacaagaac
atcaccgcggcggtttccatctacgacgcctggcaacccgccctgccctcgggcgatccg
gccaaggacaagatcatcctggtcctgccgctgttccacatctatgcgctgaccagcgtc
atgctgcggcagatcacccgcggctcctgcatgctgctgcgcatgcgcttcgaccccgac
cagaccttcgacgatttcgagaagcggcgggcgaccatattccccggcgtgccgaccatg
tggatcgcgctggtcaaccacccgcgcttcgccaccgccgacctttcctcgctcatctac
gccgcttcaggcggcgcgccgctgccggtggagatcgcgcggcgcttcgagcagcgcgcc
ggcttccgcctgaccggcggctgggggatgacggagacctcgccgtccggcaccaacgtg
ccgaacaccggcgtttcgaagccgggcacgatcggcctgccgctgccgggcctcgagatg
gacatctgcgccctcgacgatccgcacgcggtgctgccgccgcgcgagatcggcgagatc
cgcatccgcggccccaacgtcaccaccggctactggaacaagccggaggagaccaaggcg
tcctatgccgacggctggttcctcaccggcgacatcggctacatggacgaggacggcttc
ttcttcatcgtcgaccgcaagaaggacatgatcatctccggcggcttcaacgtctatccg
cagatgatcgagcaggcgatctacgagcatcccgcggtggccgaggtcatcgtgctcggc
gtccccgattcctaccgcggcgaggcggccaaggccttcgtgacgctcagggcggatgcc
aagccgttcacgctcgaggagctgcaggtcttcctgaaggacaaggtggggcggcacgag
atgccgcaagcgctggagttccgcgactcgctgccgaagaccacggtcggcaagctgtcg
cgcgccgaactgcgcaacgagatcagggcgggctga
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