Phreatobacter cathodiphilus: C6569_07520
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Entry
C6569_07520 CDS
T05356
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phr03009
]
C6569_07520
Enzymes [BR:
phr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C6569_07520
Ribosome biogenesis [BR:
phr03009
]
Prokaryotic type
ribosomal protein modification factors
C6569_07520
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AVO44924
UniProt:
A0A2S0N9S2
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Position
complement(1541114..1542457)
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AA seq
447 aa
AA seq
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MTDTATLPPPTDRAAPKISFVSLGCPKALVDSERIITRLRAEGYELSRSHQGADLVLVNT
CGFLDSAKAESLAAIGDALKENGRVIVTGCMGAEPDQIRAAHPSVLAITGPQQYESVLAA
VHEAAPPKHDPFLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPLGE
VMREAEKLVAAGVKELLVVSQDTSAYGIDVKYAESQWRDRSWRTKFLDLAQALGELGVWV
RMQYVYPYPHVDEVIPLMAEGKILPYIDIPFQHAHPDVLRRMKRPAHQEKTVERIRRWRE
ICPDLTIRSTFIVGFPGETEKEFEFLLDWLDEVGLDRVGCFKYEPVAGATSNALEGQVPP
EVMERRWHRFMKKQAEISARRLKRKVGTRQQVLVDEVGPTVVRARSKGDAPEIDGSVFIH
TRRKLAVGELVTVKIDRAGDYDLFASL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccaccctgcccccgccgaccgaccgcgccgcgccgaagatttccttc
gtctcgctcggctgcccgaaggcgctggtcgattccgagcggatcatcacgcgcctgcgc
gccgagggctacgagctgtcgcgcagccaccagggcgccgacctcgtgctcgtcaacacc
tgcggcttcctcgattcggccaaggccgagagcctggcggccatcggcgacgcgctgaag
gagaacggccgcgtcatcgtcaccggctgcatgggcgccgagccggaccagatccgggcc
gcccacccctccgtgctcgccatcaccggtccgcagcaatacgagagcgtgctggccgca
gtgcacgaggcggcgccgccgaagcacgatcccttcctcgacctggtgccgccgcagggc
atcaagctgacgccgcgccactatgcctatctcaagatttccgagggctgcaacaaccgc
tgcaccttctgcatcatccccaagctgcgcggcgacctcgtctcgcgccccctcggcgag
gtgatgcgcgaggcggagaagctggtcgcagcgggggtgaaggagctcctcgtcgtcagc
caggacacgtcggcctacggaatcgacgtgaagtatgccgagagccagtggcgcgaccgc
agctggcggacgaagttcctcgatctcgcccaggcgctcggcgaactcggcgtctgggtg
cggatgcaatacgtctacccctatccgcatgtcgacgaggtcatcccgctgatggccgag
ggcaagatcctcccctacatcgacatccccttccagcacgcccatcccgacgtgctgcgc
cgcatgaagcgcccggcgcaccaggagaagacggtcgagcggatccggcgctggcgggag
atctgcccggacctcaccattcgctccaccttcatcgtcggctttcccggcgagaccgag
aaggagttcgaattcctgctcgactggctggacgaggtcggcctcgaccgggtcggctgc
ttcaagtacgagccggtggcgggcgccacgtccaacgcgctggagggccaggtgccgccc
gaggtgatggagcggcgctggcaccgcttcatgaagaagcaggcggagatttccgcccgc
cggctgaagcgcaaggtcggcacgcgccagcaggtgctggtcgacgaggtgggccccacc
gtggtcagggcccgctcgaagggagacgcgccggagatcgacgggtcggtcttcatccac
acgaggcgcaagctcgccgtcggagagctggtcacggtgaagatcgaccgggccggcgac
tacgacctgttcgcgagtttgtga
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