Phreatobacter cathodiphilus: C6569_08310
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Entry
C6569_08310 CDS
T05356
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_08310
Enzymes [BR:
phr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C6569_08310
DNA repair and recombination proteins [BR:
phr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C6569_08310
Prokaryotic type
C6569_08310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
AVO45063
UniProt:
A0A2S0NAU4
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All DBs
Position
1696858..1698306
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AA seq
482 aa
AA seq
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MSQAPVLVWFRDDLRLADNPALARAAGSGAPVICLYIRETPTGSQRAMGAAAGWWLAQSL
RALDASLRGLGNSLVLRSGTAGEVITDVAAATGARTVLWNRRYDAGGIAIDKALKTALRS
EGLEAASLPGNLLREPWEVKSAAGEPMKVFSPFWRAHQRLGDIRVPLRAPRALPAFEGPL
PSEDLESWKLEPTRPNWASDFPQVWTPGEAGAQARLTTFLDEELAGYADGRDRPDRPSTS
RLSPHLRFGEISPVQIWHQAHIAAGMNHGRDLAKFLAELGWREFAYHLLFHWPTLASDNF
QPRFDGFPWRSDTASLRAWQRGLTGYPLVDAGMRQLWRTGWMHNRVRMVVASFLVKHLLV
DWREGERWFWDTLVDADVANNPASWQWVAGSGADAAPYFRIFNPVLQGEKFDPGGDYVRG
WVPELAALPAAAIHAPWKAPTAVLEKAGVTLGETYPAPIVDHDAARERALAALSEIRDAT
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcacccgtcctcgtctggtttcgtgatgatctccgtctcgcggacaacccg
gcgctggcgcgcgccgccgggtcgggcgcgccggtcatttgtctctacatccgggaaacg
cccacaggcagccaacgcgccatgggcgccgccgccggctggtggctggcacaaagcctg
cgggcgctcgacgcctcccttcgcgggctcggcaacagcctcgttctccggtccgggacg
gccggggaggtcatcacggacgtcgccgccgcgaccggggcccgcacggtcctatggaat
cggcgctacgacgccggcggcatcgcaatcgacaaggcgctgaagaccgccctccggtcg
gaggggctggaggcggcgagcctgcccggcaatcttctgcgcgaaccttgggaggtgaaa
tccgccgccggcgagccgatgaaggtgttctcgcccttctggcgcgcccatcagcggctg
ggcgacatccgcgtgccgctgcgcgcaccgcgcgcgctccctgccttcgagggccccctg
ccctcggaggatctcgaatcctggaagctcgagccaacccgtccgaactgggccagcgac
ttcccgcaggtctggacccccggcgaggccggcgcccaggcacgcctgaccaccttcctc
gacgaggagctcgccggctatgccgacggccgcgaccggccggaccgcccctcgacctcg
cggctgtcgccgcacctgcgcttcggcgagatctcgcccgtgcagatctggcaccaggcg
catatcgcggccggcatgaaccatggccgcgacctcgccaagttcctcgccgagctcggc
tggcgcgaattcgcctaccacctgctctttcattggccgacgctggcatcggacaatttc
cagccgcgcttcgacggctttccctggcgcagcgacaccgcgtccctgcgcgcctggcag
cgcggcctgacgggctatcccctcgtcgatgcaggcatgcgccagctctggcggaccggc
tggatgcacaaccgcgtccgcatggtcgtcgcgtcattcctggtcaagcacctgttggtc
gactggcgcgagggcgaacgctggttctgggacacgctggtcgacgccgacgtcgccaac
aatcccgccagctggcagtgggtggcgggctccggcgccgacgccgccccctacttccgc
attttcaatcccgtcctgcagggcgagaagttcgaccctggcggcgactatgtccggggc
tgggtgcccgaactcgccgcgctccccgctgcggcgatccacgccccctggaaggccccg
acggcagtcctggagaaggcgggggtcactctcggcgagacctatcccgcgccgatcgtc
gaccacgacgccgcgcgcgagcgagccctcgccgccctttccgaaatccgcgacgccacc
gcggcatga
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