Phreatobacter cathodiphilus: C6569_09025
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Entry
C6569_09025 CDS
T05356
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phr03032
]
C6569_09025 (topA)
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_09025 (topA)
Enzymes [BR:
phr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C6569_09025 (topA)
DNA replication proteins [BR:
phr03032
]
Prokaryotic type
DNA Topoisomerases
C6569_09025 (topA)
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6569_09025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AVO47598
UniProt:
A0A2S0NHG3
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All DBs
Position
1840469..1843186
Genome browser
AA seq
905 aa
AA seq
DB search
MNVVIVESPAKAKTINKYLGPDYEVVASFGHVRDLPPKDGSVDPDADFAMVWEADGRGAK
RIGEIAKLVKGADKLILATDPDREGEAISWHLLEALRDKRVLKDMPVERVTFNAITKQAV
QEAMAAPRSIDTALVEAYLARRALDYLVGFRLSPVLWRKLPGARSAGRVQSVALRLVCER
EAEIERFRKKEYWSLVATLATPRGEAFEARLVGADGQKIQRLDVGTEAEARAFEKALAEA
HFAVSGVEAKPARRHPFAPFTTSTLQQEASRKLGFAPARTMQVAQRLYEGTDIGGETVGL
ITYMRTDGVDVAPEAVSAIRGLIGKDFGPRYLPSAPRKYTSKQKNAQEAHEAIRPTDARR
HPREVARFLEPEQARLYELIWKRTVASQMESAELERTTVDIDATVGGLGTAMGRRLELRA
TGQVVKFDGFLTLYTEDRDDDGDDEDGKRLPAMTVGEKLARKAIATTQHFTEPPPRYSEA
SLVKRMEELGIGRPSTYASTLQTLQDREYVKIDKKRLVPEDKGRLVIAFLENFFERYVEY
GFTAALEERLDLVSNSELDWKALLRDFWRDFAAAIDETKELRVSDVLSALNDSLGPHIFP
DKGDGSNPRACPVCGTGALSLKLGKFGAFIGCSNYPECRFTRQLAAPGPDSEGDGPASAG
ADGTRKLGEDPVTGLEVTVRDGRFGPYVQLGEGEKPKRSSLPKGMTPAGLDLERALALLE
LPKEVAKHPESGKPILVGIGRYGPYVQHEKTYANLEKDDDVLAIGANRAIDLVIAKESGA
KSRFGRGSAPAGRELGEHPTLGGPVTVMAGRYGPYVKHGAVNATLPKGKDAATLTMEEAV
PLLAARAEAAGSGKKGPARGKAKAAAKPKTSAEAKPKAAAKSKAAAKGSKTAKPAAKAKV
AKSEA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcgtcatcgtcgagtcgccggccaaggccaagacgatcaacaaatatctgggt
ccggactacgaggtcgtcgcctcgttcggccatgtgcgcgacctgccccccaaggacggg
tccgtggatcccgatgccgacttcgccatggtctgggaggcggacggtcgcggcgccaag
cgcatcggcgagatcgccaagctggtcaagggcgccgacaagctgatcctcgccaccgac
cccgaccgcgagggcgaggccatttcctggcaccttctggaggcgctgagggacaagcgc
gtcctgaaggacatgccggtcgagcgcgtcaccttcaacgccatcaccaaacaggccgtg
caggaggccatggccgccccgcggtccatcgacaccgccctggtggaggcctatctcgcc
cgccgcgccctcgactatctcgtcgggttccgcctctcgccggtgctgtggcgcaagctg
cccggcgcccgctcggccggccgcgtccagtccgtggcgttgaggctggtctgcgagcgc
gaggccgagatcgagcgcttccgcaagaaggaatactggtccctcgtggcgaccctcgcc
acgccgcgcggcgaagccttcgaggcccgcctcgtcggcgccgacggacagaagatccag
cggctcgacgtcggcaccgaggccgaagcccgcgccttcgagaaggcgctggcggaggcc
catttcgccgtctccggcgtcgaggccaagcccgcccggcgccaccccttcgcgcccttc
accacctcgaccctccagcaggaggcgagccgcaagctcggcttcgcaccggcgcgcacc
atgcaggtggcccagcgcctctacgagggcaccgacatcggcggcgagacggtcggcctc
atcacctatatgcgaaccgacggcgtcgacgtggcgcccgaggcagtcagcgccatccgc
ggcctcatcggcaaggatttcgggccgcgctatctgccgagcgcgccgcgcaaatacacc
tccaagcagaagaacgcccaggaggcccacgaggccatccggccgaccgacgcgcgccgc
catccgcgcgaggtcgcccgcttcctcgagccggaacaggcccgcctctacgagctcatc
tggaagcgcaccgtcgcctcgcagatggagagcgccgagctcgagcggaccacggtcgac
atcgatgcgacggtgggcggcctcggcaccgccatgggccggcggctggagctgcgcgcc
accggccaggtggtgaagttcgacggcttcctcaccctctataccgaggaccgcgacgac
gacggcgacgacgaggacggcaagcgcctgccggccatgacggtcggcgagaagctcgcc
cgcaaggccatcgccaccacccagcacttcaccgagccgccgccgcgctattcggaggcg
agcctcgtcaagcgcatggaggagctcggcatcggccggccctccacctatgcctcgacc
ctgcagaccctgcaggaccgggaatacgtgaagatcgacaagaagcgcctcgtccccgag
gacaagggccgcctcgtcatcgccttcctggaaaacttcttcgagcgctacgtcgaatac
ggcttcaccgcagccctggaggagcggctcgacctcgtctccaacagcgaactcgactgg
aaggcgctgctgcgcgacttctggcgcgatttcgccgccgccatcgacgagaccaaggag
ctgcgcgtctccgatgtgctctccgcgctcaacgacagcctcgggccgcacatcttcccc
gacaagggcgacggctccaacccgcgggcctgccccgtctgcggcaccggcgcgctgtcc
ctcaagctcggcaagttcggcgccttcatcggctgctcgaactatcccgaatgccgcttc
acccgccagctcgccgcgccgggcccggattcggagggtgacggccccgcctcggccgga
gccgacggcacgcgcaagctcggcgaggatccggtcaccggcctcgaagtcacggtgcgt
gacggccgcttcggcccctatgtgcagctcggcgagggcgagaagccgaagcgctcctcc
ctgcccaagggcatgacgccggccgggctcgacctcgaacgggcgctcgccctcctcgaa
ctgccgaaggaggtcgcgaagcaccccgagagcggcaagcccatcctcgtcggcatcggc
cgctatggcccctatgtccagcacgagaagacctacgccaacctggagaaggacgacgac
gtgctggcgatcggcgccaaccgcgccatcgatctcgtcatcgccaaggagagcggcgcc
aagagccgcttcggccgcggcagcgccccggcgggccgcgagctcggcgaacatccgacc
ctcggcggccccgtcaccgtcatggccggccgctacggcccctacgtgaagcacggcgcg
gtcaacgccaccctgcccaagggcaaggacgccgcgacgctgaccatggaggaggccgtc
cccctgctcgccgcccgggcggaggccgccggctccggcaagaagggccctgcccgcggc
aaggcgaaggctgccgccaagcccaagacctctgcggaagccaagcccaaggccgccgcg
aagtcgaaggccgccgccaaggggtccaagacggcgaaacccgcggcgaaggccaaggtt
gccaaatcggaggcttga
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