Phreatobacter cathodiphilus: C6569_10900
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Entry
C6569_10900 CDS
T05356
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00521
Streptomycin biosynthesis
phr00523
Polyketide sugar unit biosynthesis
phr00525
Acarbose and validamycin biosynthesis
phr00541
Biosynthesis of various nucleotide sugars
phr01100
Metabolic pathways
phr01110
Biosynthesis of secondary metabolites
phr01250
Biosynthesis of nucleotide sugars
Module
phr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C6569_10900 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C6569_10900 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C6569_10900 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C6569_10900 (rfbB)
00525 Acarbose and validamycin biosynthesis
C6569_10900 (rfbB)
Enzymes [BR:
phr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C6569_10900 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
NAD_binding_4
KR
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AVO45532
UniProt:
A0A2S0NBJ6
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All DBs
Position
2231385..2232446
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AA seq
353 aa
AA seq
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MHRVMITGGAGFIGSATCRHLVSAGVDVLNLDKLTYAGNLASLRPIENAPNYRFARVDIC
DRGAVTEAFESFQPTRVIHLAAESHVDRSISASGDFIDTNIVGTFVMLEAARRYWSGLPA
ERGEAFRFLHVSTDEVYGSLGEEGLFTETTPYDPSSPYSASKAAADHLVSAWARTYGFPG
LISNCSNNYGPFHFPEKLIPLVILNALHGKPLPVYGKGDNIRDWLFVDDHARALDLIVNR
GRIGEKYNVGGRNERRNIDVVRTICAILDRLAPKAEPHASLITFVTDRPGHDQRYAIDAG
KLEAELGWRAEETFDTGIEKTVRWYLDNEWWWRPLRDKVYAGERLGLLAPAGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcgtgatgatcacaggaggagccgggttcatcggttccgccacctgccgccat
ctggtctccgccggcgtcgacgtgctcaatctcgacaagctgacctacgcaggcaatctg
gcctcgctccgaccgatcgagaacgcgccgaactaccgcttcgcccgggtggacatctgc
gaccgcggcgccgtcaccgaggccttcgaatccttccagcccacccgcgtcatccatctc
gccgccgaaagccatgtcgaccggtcgatcagcgcctcgggggatttcatcgacaccaac
atcgtcggcaccttcgtgatgctggaggccgcccggcgctactggtccggcctgccggcg
gagcgcggcgaggccttccgcttcctgcacgtctcgaccgacgaggtctacggctccctc
ggcgaggagggcctgttcaccgagacgacgccctatgatccctcctcgccctattccgcc
tccaaggcggcggccgatcatctcgtctcggcctgggcgcgcacctacgggtttcccggc
ctcatctccaactgctcgaacaattacgggcccttccactttcccgagaagctgattccg
ctcgtcatcctcaacgccctccacggcaagccgctgccggtctacggcaagggcgacaac
atccgcgactggctcttcgtcgacgaccacgcccgcgccctggacctgatcgtcaaccgc
ggccggatcggcgagaaatacaatgtcggcggccgcaacgagcggcgcaacatcgacgtg
gttcgcaccatctgcgccatcctcgaccgcctcgcccccaaggccgaaccacacgcctcg
ctgatcaccttcgtgacggaccggcccggccacgaccagcgctatgcgatcgacgccggc
aagctcgaagccgagctcggatggcgcgccgaggaaaccttcgacaccggcatcgagaag
acggtgcgctggtatctcgacaacgagtggtggtggcgccccctgcgcgacaaggtctat
gcgggcgaacgcctcggcctcctcgcccctgccggagcctga
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