Phreatobacter cathodiphilus: C6569_10900
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Entry
C6569_10900 CDS
T05356
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00521
Streptomycin biosynthesis
phr00523
Polyketide sugar unit biosynthesis
phr00525
Acarbose and validamycin biosynthesis
phr00541
O-Antigen nucleotide sugar biosynthesis
phr01100
Metabolic pathways
phr01110
Biosynthesis of secondary metabolites
phr01250
Biosynthesis of nucleotide sugars
Module
phr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
C6569_10900 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C6569_10900 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C6569_10900 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C6569_10900 (rfbB)
00525 Acarbose and validamycin biosynthesis
C6569_10900 (rfbB)
Enzymes [BR:
phr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C6569_10900 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
NAD_binding_4
KR
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AVO45532
UniProt:
A0A2S0NBJ6
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Position
2231385..2232446
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AA seq
353 aa
AA seq
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MHRVMITGGAGFIGSATCRHLVSAGVDVLNLDKLTYAGNLASLRPIENAPNYRFARVDIC
DRGAVTEAFESFQPTRVIHLAAESHVDRSISASGDFIDTNIVGTFVMLEAARRYWSGLPA
ERGEAFRFLHVSTDEVYGSLGEEGLFTETTPYDPSSPYSASKAAADHLVSAWARTYGFPG
LISNCSNNYGPFHFPEKLIPLVILNALHGKPLPVYGKGDNIRDWLFVDDHARALDLIVNR
GRIGEKYNVGGRNERRNIDVVRTICAILDRLAPKAEPHASLITFVTDRPGHDQRYAIDAG
KLEAELGWRAEETFDTGIEKTVRWYLDNEWWWRPLRDKVYAGERLGLLAPAGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcgtgatgatcacaggaggagccgggttcatcggttccgccacctgccgccat
ctggtctccgccggcgtcgacgtgctcaatctcgacaagctgacctacgcaggcaatctg
gcctcgctccgaccgatcgagaacgcgccgaactaccgcttcgcccgggtggacatctgc
gaccgcggcgccgtcaccgaggccttcgaatccttccagcccacccgcgtcatccatctc
gccgccgaaagccatgtcgaccggtcgatcagcgcctcgggggatttcatcgacaccaac
atcgtcggcaccttcgtgatgctggaggccgcccggcgctactggtccggcctgccggcg
gagcgcggcgaggccttccgcttcctgcacgtctcgaccgacgaggtctacggctccctc
ggcgaggagggcctgttcaccgagacgacgccctatgatccctcctcgccctattccgcc
tccaaggcggcggccgatcatctcgtctcggcctgggcgcgcacctacgggtttcccggc
ctcatctccaactgctcgaacaattacgggcccttccactttcccgagaagctgattccg
ctcgtcatcctcaacgccctccacggcaagccgctgccggtctacggcaagggcgacaac
atccgcgactggctcttcgtcgacgaccacgcccgcgccctggacctgatcgtcaaccgc
ggccggatcggcgagaaatacaatgtcggcggccgcaacgagcggcgcaacatcgacgtg
gttcgcaccatctgcgccatcctcgaccgcctcgcccccaaggccgaaccacacgcctcg
ctgatcaccttcgtgacggaccggcccggccacgaccagcgctatgcgatcgacgccggc
aagctcgaagccgagctcggatggcgcgccgaggaaaccttcgacaccggcatcgagaag
acggtgcgctggtatctcgacaacgagtggtggtggcgccccctgcgcgacaaggtctat
gcgggcgaacgcctcggcctcctcgcccctgccggagcctga
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