Phreatobacter cathodiphilus: C6569_12000
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Entry
C6569_12000 CDS
T05356
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phr01002
]
C6569_12000
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phr01011
]
C6569_12000
Peptidases and inhibitors [BR:
phr01002
]
Cysteine peptidases
Family C82
C6569_12000
Peptidoglycan biosynthesis and degradation proteins [BR:
phr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C6569_12000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
TraI_2_C
Motif
Other DBs
NCBI-ProteinID:
AVO45727
UniProt:
A0A2S0NCG5
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All DBs
Position
complement(2458654..2460372)
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AA seq
572 aa
AA seq
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MIEKRYVQKGAVRAGFARRTEGTTMHWQSAFLACALIGSGSLATAQAEPAQRFRLADWEV
EQAIPRPPLDAVGPVAARDFGLEAFPPSPILAEAPNADDEAPETARAPEVPQPTEADFAA
IPDDPPSLLEEGQPDPAITVERVAQQLRIILARPGGDRALQQQLNPFYAGRGYQPLFVRD
GVVAERGQAALTRLGQAGEDGLDPAAYRIQLPTGPRTAESVARLELALARAVALYASHAS
GGRTDPKRLSGYFDVSPPRIETTAALESVARAENVTAAIDGFNPPHPGFRRLRAKLVEMR
GERREMTTTEATRRHALRERDLIANLERWRWLPRQLGETHIWVNSTEAQVNVVQGTQVVH
STRAVVGRPETQTPVFSDAMSFIVLNPSWHVPISIVRRSMLGPASRNGGGYFARRGIQVT
QGGRVVDASTINWASANVGRYTFRQPPGTANALGRMKFMFPNRHAIYLHDTPSRGDFGRS
NRTLSNGCVRVQNPEELAALLLGIALPGENWTIGRMRSLYGGGERSVRFRQAIPIHLVYF
TMTVDSTGALVELPDVYGHNARVRAALSGGRG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaaacgctacgtgcagaagggggcggtccgtgccggattcgctcgcaggacc
gaggggaccacgatgcattggcagtcggctttccttgcttgcgccctgatcggctcagga
tcgctggcaacggcacaggccgaaccggcccagcgcttccgtctcgccgactgggaggtc
gaacaggccatcccgcgcccgccgctcgacgcggtcggaccggtggcggcgcgtgacttc
ggccttgaagccttcccgccctcgccgatcctcgccgaagctcccaacgccgacgacgag
gcccccgagacggcgcgcgcccccgaggtgccgcagccgacggaagccgatttcgccgcc
atccccgacgatccgccgagcctcctcgaggagggccagcccgaccccgccatcacggtg
gagcgcgtcgcccagcagttgcgcatcatcctggcgcgtcccggcggcgaccgcgccctg
cagcagcagctcaaccccttctatgccggccgcggctaccagccgctcttcgtgcgcgac
ggcgtggtcgcggaacgcggtcaggcggccttgacccggctcggccaggccggcgaggac
ggtctcgatcccgccgcctaccgcatccagcttcccaccggcccgcgcaccgccgagagc
gtcgctcggctcgaactggcgctggcccgtgccgtggcgctctacgcctcccacgcctcg
ggcggccgcaccgatccgaagcgcctgtccggttatttcgacgtgtcgccgccgcgcatc
gagacgaccgcggcgctggagagcgtcgcccgcgccgagaacgtcaccgccgccatcgac
ggcttcaatccgccccatcccggcttccgccgcctgcgcgccaagctcgtcgagatgcgc
ggcgagcggcgcgagatgaccaccaccgaggcgacgcgccgccacgcgctgcgcgagcgc
gacctcatcgccaacctggagcgctggcgctggctgccgcgccaactcggcgagacccat
atctgggtcaattccaccgaggcgcaggtcaacgtcgtgcagggcacgcaggtcgtccac
agcacccgcgccgtggtcgggcgaccggagacccagacgcccgtcttctccgacgcgatg
agcttcatcgtgctcaatccgtcctggcacgtgccgatctcgatcgtgcggcgctccatg
ctcgggccggccagccgcaacggcggcggctatttcgcccgccgcggcatccaggtgacg
cagggcggccgggtcgtcgacgcctcgaccatcaactgggcctcggccaatgtcggccgc
tacacgttccgccagccgccgggcacggccaacgccctcggccgcatgaagttcatgttc
ccgaaccgccacgcgatctacctgcacgacacgccctcgcgcggcgatttcggccggtcc
aaccgcacgctctccaacggctgcgtcagggtgcagaatcccgaggagctggcggcgctg
ctgctcggcatcgccctgcccggggagaactggacgatcggccggatgcgcagcctctat
ggcggcggcgagcgctccgtgcgcttccgccaggcgattccgatccatctcgtctatttc
acgatgacggtggattcgaccggcgcgctggttgagcttcccgacgtctacggccacaat
gcgcgagtcagggccgcgctttcaggcgggcgcggttaa
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