Phreatobacter cathodiphilus: C6569_12435
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Entry
C6569_12435 CDS
T05356
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr02020
Two-component system
phr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C6569_12435
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C6569_12435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phr02022
]
C6569_12435
02035 Bacterial motility proteins [BR:
phr02035
]
C6569_12435
Two-component system [BR:
phr02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
C6569_12435
Bacterial motility proteins [BR:
phr02035
]
Flagellar system
Flagellar assembly proteins
Others
C6569_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA_3
AAA
AAA_19
AAA_22
MCM
AAA_PrkA
TIP49
AAA_18
AAA_7
HTH_50
nSTAND3
MerR
HTH_Tnp_ISL3
Myosin_head
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AVO45810
UniProt:
A0A2S0NCB7
LinkDB
All DBs
Position
complement(2546560..2547939)
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AA seq
459 aa
AA seq
DB search
MRLLIVGTLKGQLSIATKMAVDKGAAVTNAEDIETALRVMRAKGADLVMVDVAMDVRALV
QAFADEMIAVPIVACGTSNDARAAVAAIHAGAKEYIPLPPDPELIAAVLAAVADDAKQLI
YRDEAMARVVQLANQVAGSDASILITGESGTGKEVLARYVHTKSNRAKAPFVAVNCAAIP
DNLLESELFGHEKGAFTGAVARRIGKFEEANGGTLLLDEISEMDIRLQSKLLRAIQERVI
DRVGGTRPVPVDIRILATSNRTLAEEVRKGTFREDLLYRLNVVNLKLPPLRERPADILEL
AGHFAKKYAEANGMAPKPLSAEARRQLTVARWPGNVRELENTMHRAVLLSSGPDIGVDAI
RTPDGARLDERRGPDAVAAQAAIAAEAVTRGLVGRTVADVERDLILDTLGHTLGNRTHAA
NILGISIRTLRNKLNQYADEGHAIPPPPQGEARYEMRYG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgctgatcgtcggaacactcaaggggcagctctccatcgccaccaagatggcc
gtggacaagggcgccgccgtcaccaatgccgaggacatcgagacggcgctgcgcgtgatg
cgcgccaagggcgccgatctcgtcatggtggacgtcgccatggacgtgagggcgctggtg
caggccttcgcggacgagatgatcgccgtgccgatcgtcgcctgcggcacctccaacgac
gcccgcgccgcggtggccgcgatccatgcgggggcgaaggaatacatcccgctgccgccg
gatccggagctcatcgccgcggtgctggcggcggtcgcagacgacgccaagcagctcatc
taccgcgacgaggccatggcccgcgtggtccagctcgccaaccaggttgcggggtccgac
gcctccatcctcatcaccggcgagagcggcaccggcaaggaggtgctggcgcgctacgtc
cacaccaagtcgaaccgggccaaggcccccttcgtggcggtgaactgcgccgccattccc
gacaacctcctggagagcgagctcttcggccacgagaagggcgccttcaccggcgccgtg
gcgcgccgcatcggcaagttcgaggaggccaacggcggcacgctgctgctcgacgaaatc
tcggagatggacatccgcctgcagtcgaagctcctgcgcgccatccaggagcgcgtgatc
gaccgcgtcggcggcacccggccggtgcccgtcgacatccgcatcctcgcgacctccaac
cggacgctggcggaggaggtgcgcaagggcacgttccgcgaggatctcctctaccgcctc
aacgtcgtcaacctgaagctgccgccgctgcgcgagcgcccggccgacatcctcgaactc
gccggccatttcgccaagaaatatgccgaggccaacggcatggcgccgaagcccctctcg
gccgaggcccgccggcaactcaccgttgcccgctggccgggcaacgtgcgcgagctggag
aacaccatgcaccgcgccgtgctgctctcgtcgggcccggatatcggcgtcgacgccatc
cgcacgccggacggcgcccggctcgacgagcggcgcgggccggatgcggtggcggcgcag
gcggcgatcgcggcggaggcggtcacccgcggcctcgtcgggcgcaccgtcgcggacgtg
gagcgcgacctcatcctcgacacgctcggccacacgctcggcaaccgcacccatgcggcc
aatattctcggcatctccatccgcacgctgcgcaacaagctgaaccagtatgcggacgag
ggccacgccatcccgccgccgccgcagggcgaggcgcgctacgagatgcgctacggctga
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