KEGG   Phreatobacter cathodiphilus: C6569_15520
Entry
C6569_15520       CDS       T05356                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
phr  Phreatobacter cathodiphilus
Pathway
phr03030  DNA replication
phr03410  Base excision repair
phr03420  Nucleotide excision repair
phr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C6569_15520
   03410 Base excision repair
    C6569_15520
   03420 Nucleotide excision repair
    C6569_15520
   03440 Homologous recombination
    C6569_15520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phr03032]
    C6569_15520
   03400 DNA repair and recombination proteins [BR:phr03400]
    C6569_15520
Enzymes [BR:phr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C6569_15520
DNA replication proteins [BR:phr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C6569_15520
DNA repair and recombination proteins [BR:phr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C6569_15520
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C6569_15520
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AVO46349
UniProt: A0A2S0NDU9
LinkDB
Position
3233858..3236881
AA seq 1007 aa
MHTEHHRPVGKGDRVFLVDASSFVFRAYFQSMNQDRKYNARSDGLPTGAVRLFSTKVLQF
VEDGALGVKPTHLAMILDKSENSFRKELYPLYKAQRPPPPEDLVPQFPLMRAAIRAFGLH
AIEQDRYEADDLIATYCDMACSRGADVLIISADKDLMQLVRPCVAFYDPESGIKGKPGYR
PERLLTHGDRFERWNVPADKIGDVTEYWEGMPPEKIVDIQSLEGDTSDNVPGAPGIGRKT
AAQLIAEYGDLDTLLARAGEIKQPKRRETLTDPAVIEKVRISKQLVQLVRNVEVEVPLDE
TGLVKPDGHRLISFFKALEFTTITKKVGELYGVDPAKVDPDPTLAAGPKPAAVAAAVAAE
GGEATPPAAADAGAPTPQTLAARTAERLRASAIDRTRYRCITTLEALDAFIAGAREAGVV
GIDTETNSLDPMSADLVGFSLAYGPDEACYVPLAHRAGEAGLFDSGLVEGQVPMREALER
LKSLTEDPGVLKVGQNLKFDMLVLSRYGLGLGPYDDTMLMSYALDAGRGQNGMDALSLKH
LGHEAISYDSVTGTGKGRVTFDRVDLDRATAYAAEDADVTLRLWRVLKPRLAAEAKATVY
ETLERPLVDVLARMERRGILIDRQVLSRLSGDFAQVAARVEAEIQELAGEPLNPGSPKQL
GDILFGKMGLPGGTKTKTGAWSTAAGVLEDLAEEGHALPRKIIDWRTVTKLKSTYTDALP
TYINATTGRVHTSFALAATTTGRLSSSEPNIQNIPVRTEEGRKIRTAFIAPPGAKLVSAD
YSQIELRILAHMADIPQLRQAFADGIDIHAMTASEMFGVPVQGMDPLVRRRAKAINFGII
YGISAFGLANQLSIPRDEAGAYIRRYFERFPGIRDYMDATKAFVREHGYVETIFGRRCHF
PAIRSGNPSERAFVERQAINAPIQGSAADIIRRAMTRMDAALEAAGLDALMLLQVHDELV
FEVPDDQVDRTLPVIKRVMEEATHPALQLKVPLAVDARAAVNWEEAH
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgcataccgagcaccaccgccccgtcggcaagggcgaccgcgtcttcctcgtcgacgcg
tcctccttcgtcttccgcgcctatttccagtcgatgaaccaggaccggaagtacaatgcg
cgctcggacggcctgccgaccggggccgtgcgcctgttctcgaccaaggtgctgcagttc
gtcgaggacggtgccctcggcgtgaagccgacccacctcgccatgatcctcgacaagagc
gagaactccttccgcaaggagctctacccgctctacaaggcgcagcgcccgccgccgccg
gaagacctggtgccgcagtttccgctgatgcgcgccgccatccgcgccttcggcctgcac
gccatcgagcaggaccgctacgaggccgacgacctcatcgccacctattgcgacatggcc
tgctcgcgcggcgccgacgtgctgatcatctccgccgacaaggacctgatgcagctcgtg
cgcccctgcgtcgccttctacgatcccgagagcggcatcaagggcaagcccggctatcgt
cccgagcgcctgctcacccacggcgaccgcttcgagcgctggaacgtgccggccgacaag
atcggcgacgtcaccgagtactgggagggcatgccgccggagaagatcgtcgacatccag
tcgctcgaaggcgacacctccgacaacgtgcccggcgcgcccggcatcggtcgcaagacg
gccgcccagctcatcgccgaatacggcgacctcgacacgctgctcgcccgcgccggcgag
atcaagcagccgaaacgccgggagaccctgaccgaccccgcggtgatcgagaaggtgcgc
atctcgaagcagctcgtccagctcgttcgcaacgtcgaggtcgaggtgccgctcgacgag
accggcctggtgaagcccgacggccaccggctgatttccttcttcaaggcgctggaattc
accaccatcaccaagaaggtcggcgaactctacggcgtcgatccggccaaggtcgacccc
gacccgaccctcgcggcaggcccgaagccggccgccgtcgccgccgccgtggcggccgag
ggcggggaggccacgccgcccgccgccgcggatgcgggagcgccgacgccgcagaccctc
gccgcccgcaccgccgagcggctgcgcgcctccgcgatcgaccgcacgcgctaccgctgt
atcacgacgctggaggcgctcgacgccttcatcgccggcgcgcgggaggcgggcgtcgtc
ggcatcgacaccgagaccaattcgctggaccccatgtcggccgacctcgtcggcttctcc
ctcgcctatgggccggacgaggcttgttacgtgccgctggcccaccgcgccggcgaggcg
ggcctgttcgattccggcctcgtcgaggggcaggtcccgatgcgcgaggcgctcgagcgg
ctgaagagcctcaccgaggatcccggcgtgctgaaggtcgggcagaacctcaagttcgac
atgctcgtcctctcccgctacggccttggcctcggcccttacgacgacaccatgctgatg
tcctatgcgctcgatgccggccgcggccagaacggcatggacgcgctgtcgctgaaacat
ctcggtcacgaggccatcagctacgattccgtcaccggcaccggcaagggccgcgtcacc
ttcgatcgcgtcgatctcgaccgcgccaccgcctatgccgccgaggacgccgacgtgacg
ctgcggctctggcgggtgctcaagccccgtctcgccgccgaggccaaggcgacggtctac
gagacgctggagcgcccgctcgtcgatgtgctcgcccgcatggagcggcgcggcatcctc
atcgaccggcaggtgctctcccgcctgtcgggcgatttcgcgcaggtcgcagcccgcgtc
gaggccgagatccaggagctcgccggcgagccgctcaaccccggctcgcccaagcagctc
ggcgacatcctgttcggaaaaatgggcctgcccggcggcacgaagaccaagacgggggcc
tggtcgaccgcggccggcgtgctggaggacctcgcggaggagggccacgcgctgccccgc
aagatcatcgactggcgcacggtgacgaagctcaagtcgacctataccgacgcgctgccg
acctacatcaacgccacgacgggcagggttcacacctccttcgccctcgcggcgacgacc
acaggccggctctcctcctccgagccgaacatccagaacattcctgtccgcaccgaggag
gggcgcaagatccgcacggccttcatcgccccgccgggcgccaagctcgtctcggccgac
tattcgcagatcgagctgcgcatcctcgcccacatggccgatatcccgcagctccggcag
gccttcgccgacggcatcgacatccacgccatgacggcctcggaaatgttcggcgtgccc
gtgcagggcatggacccgctggtgcgccgtcgggccaaggccatcaacttcggcatcatc
tacggcatctcggccttcggcctcgccaaccagctctccatcccgcgcgacgaggccggc
gcctatatcaggcgctatttcgagcgtttccccggcatccgcgactacatggacgccacc
aaggccttcgtccgagaacacggctatgtcgagacgatcttcggccggcgctgccatttc
ccggcgatccgctcgggcaacccgtcggagcgcgccttcgtcgagcggcaggccatcaac
gccccgatccagggctcggccgccgacatcatccgccgcgccatgacgcgtatggacgcg
gccctggaggccgccggcctcgacgcgctgatgctgctgcaggtgcacgacgaactggtc
ttcgaggtgccggacgaccaggtcgaccgtacgctccccgtcatcaagcgggtgatggag
gaggcgacgcacccggcgctgcagctcaaggtgccgctggcggtggatgcccgcgccgcg
gtgaactgggaagaggcgcattag

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