Phreatobacter cathodiphilus: C6569_18120
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Entry
C6569_18120 CDS
T05356
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_18120 (addA)
Enzymes [BR:
phr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6569_18120 (addA)
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C6569_18120 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVO46824
UniProt:
A0A2S0NF69
LinkDB
All DBs
Position
complement(3784970..3788410)
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AA seq
1146 aa
AA seq
DB search
MSRNLSAPPEAVLAQRRASDPAHSAWVSANAGSGKTYVLARRVVRLMLAGTPPGAILCLT
FTKAAAATMANRVFELLGQWAVMDDATLRDALHALDGENHDAATLRRARRLFAEALETPG
GLKVQTIHAFCERVLHQFPFEANVASQFTVLDEREHEEMVRRAKLAILLEAAAEPDGRTG
QALAYLSTVAADSTVDDLLGEALAARHAMEADIAARGGLERTIGTLGDLFGLLPGETEAA
LAAAIVAEAELPPSEWAGVAETLLHLSTAASDTGVAAALREAERMPERRAELYERIFLKA
DGDPRQRLVTKAVATREPALCALLERERARLAELRQKRKAAQLRDGTAALLTLAQAICER
VETEKAARGALDFADLIVRTRDLLRNGSAPWILYKLDQGIDHVLVDEAQDTSPDQWEIVG
ALIEEFTAGEGARGMPRTLFVVGDEKQSIYSFQGAVPQNFSSLRDDFARRFAAAERPFER
QIRLNFSFRSTRAVLSAVDRVFADEEARKGLSFTPGPLTPHEAARQAAPGLVELWPATEP
ESAEDRSPWTAPVDAPTLGDAAERLAARIARHVRLWLDQGHRLPDRDRPIRAGDILVLVR
RRGPIFESIIRALKNAGVPVAGADRLVLGEHIAVMDLLALGDCLLTPDDDLSLAAVLKSP
LVGMGEEELLEIAAGRTGSLWDALAEDAHPAATRLAGWRDEALALSPAAFYGRVLARDGG
RRAMLARLGSEAADALDEFMSMALAFESTDIPTLRGFLAAMRASEVNVKRDMELGRDEVR
VMTVHGAKGLEADIVFLADTMGKPGGSHDPKIFAIRPANAPADSPPRLVWSPASKADTPL
VAEARRMSRDAQAEEYRRLLYVAMTRAADRLIVCGARPKKPSPDVWYDIIDRTIGSEAVE
EPADDGDGVVKRWRNGPVAAAADAPAVSAATPAGRTALPDWLVRPAPAVAVPPRALTPSG
FGGEAGPARSREASTSREAAMRRGTIVHRLLQSLPDLPFDRRAEAAGRFLAAQSDIEDEQ
AARLAEEAMRVMTDPRVAGLFGPGSRAEVPVAGRLGGKPVSGQIDRLLVTPERVIIADFK
TNVPAPVRLDDVPEAYLAQLAIYRALLAGIVPGRPVEAWLIWTTLPDVMAVPAESLDAML
AQLGLA
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaacctctcagccccgcccgaagccgtcctcgcccagcggcgggcctcggat
cccgcccattccgcctgggtttcggccaatgccgggtcgggcaagacctatgtgctggcg
cgccgtgtcgtcaggctcatgctggccggcacgccgccgggcgccatcctgtgcctgacc
ttcaccaaggcggcggcggcgaccatggccaaccgcgtcttcgagctgctcgggcaatgg
gcagtgatggacgacgcaacgctgcgcgacgccctccatgccctcgacggcgagaaccac
gacgccgcgacgctgcgccgggcgcgccggctcttcgccgaggcgctggagacgcccggc
ggcctcaaggtgcagacgatccacgccttctgcgaacgcgtgctgcaccaattccccttc
gaggcaaacgtcgcctcgcagttcaccgtcctggacgagcgcgagcacgaggagatggtg
cggcgggccaagctcgccatcctgctggaggccgctgccgaacccgacgggcggaccggg
caggcgctcgcctatctctccacggtcgccgccgattcgacggtggacgacctgctcgga
gaggccctggccgcccgccacgccatggaggcggacatcgcggcccgcggcggcctcgag
cggaccatcggcacgctcggagacctgttcggcctgctgcccggcgagaccgaggcggcg
ctggccgcggccatcgtcgccgaggcggagctgccgccgtccgaatgggccggcgtcgcc
gaaacgctgctgcacctctccaccgccgcctccgacaccggcgtggcggcggcgctgcgc
gaggcagagcggatgccggaacggcgggcggagctctacgagcgcatcttcctcaaggcc
gatggcgaccccaggcaaaggctcgtcaccaaggcggtggcgacgcgcgagccggccctc
tgcgccctcctcgagcgagaaagggcgcggctcgcggagctgcggcagaagcgcaaggcg
gcgcagcttcgcgacggcacggcggcgctgctcaccctggcgcaagcgatctgcgagcgc
gtggagacggaaaaggcggcgcgcggggcgctcgacttcgccgacctcatcgtgcgcacg
cgcgatctgctgcgcaacggctcggcgccgtggatcctctacaagctggaccagggcatc
gaccacgtgctggtggacgaagctcaggacaccagccccgaccagtgggagatcgtcggc
gccctgatcgaggagttcacggcgggcgagggcgcgcgcggcatgccgcgcacgctcttc
gtcgtgggcgatgagaagcaatcgatctattcgttccagggcgcggtgccgcagaacttc
agcagcctgcgcgacgacttcgcccgcaggttcgccgcggccgaacggcccttcgaacgg
cagatccgactcaacttctcgttccgctcgacccgcgccgtgctcagcgccgtcgaccgg
gtcttcgccgacgaggaggcgcgcaagggcctgtccttcacgccgggaccgctgacgccg
cacgaggcggcgcgccaggcggcgccgggcctcgtggaactctggcccgccaccgagccg
gagagcgccgaggaccgctcgccctggaccgcgccggtcgacgcgccgaccctcggcgac
gccgccgagcggctggcggcgcggatcgcccgccatgtccggctctggctcgaccaggga
caccgcctgccggaccgcgaccggccgatccgggcgggggacatcctcgttctggtgcgg
cggcgcgggccgatcttcgagagcatcatccgcgcgctgaagaatgccggggtgccggtg
gccggtgccgaccggctggtgctcggcgagcatatagcggtgatggatctcttggcgctg
ggcgactgcctgctgacgcccgacgacgatctgtcgctcgccgccgtgctgaagagcccg
ctcgtcggcatgggcgaggaggagttgctggagatcgccgcggggcgcaccggctcgctc
tgggacgccctggccgaagacgcgcaccccgccgccacccgcctcgccggctggcgcgac
gaagccctggcgctgtcgccggctgccttctacggccgggttctggcgcgcgacggcggc
aggcgggccatgctggcgcggctcggatcggaggcggccgacgccctcgacgaattcatg
tccatggcgctggccttcgaatcgacggacatcccgacgctgcgcggcttcctcgccgcc
atgcgcgcgagcgaggtcaacgtgaagcgcgacatggagctcggccgcgacgaggtgcgc
gtcatgaccgtccacggcgccaagggcctcgaggccgacatcgtctttctcgccgacacg
atgggaaagccgggcggcagccacgacccgaagattttcgccatccgcccggccaatgcg
ccggccgattcgccgccgcgcctcgtctggtcgccggcctccaaggccgatacgccgctg
gtggcggaagcgcgccggatgagccgcgacgcgcaggcggaggaataccgtcgcctgctc
tacgtggcgatgacgcgggcggcggaccggctgatcgtctgcggcgcccggccgaaaaag
ccgagcccggacgtctggtacgacatcatcgaccggaccatcggcagcgaggcggtggag
gagccggccgacgacggcgacggcgtggtgaaacgctggcgcaacgggccggtcgccgcc
gccgcggacgcgcctgccgtctccgcagcgacgccggcgggccgtacggcgctgccggac
tggctcgtccggccggctcccgcggtcgccgttccaccgcgggcgctcacgccgtcgggc
ttcggcggcgaggcgggtccggcccgctcgcgcgaggcctcgacgagccgcgaggcggcg
atgcgccgcggcaccatcgtccaccggctgctgcagtccctgcccgacctgcccttcgac
aggcgggcggaagccgccggccgcttcctcgcggcgcaaagcgacatcgaggacgagcag
gcggcgcgtctcgccgaggaggcgatgcgggtgatgaccgatccgcgcgtggcgggcctg
ttcggcccgggaagccgggcggaggtgccggtcgccgggcggctcggcggcaagccggtc
tccggccagatcgatcggctcctggtgacgccggagcgggtgatcatcgccgatttcaag
accaacgtcccggcgcccgtccgcctcgacgacgtgcccgaggcctatctcgcgcagctc
gccatctaccgggcgctgctcgccggcatcgtgccgggccggccggtcgaggcctggttg
atctggacgacgctgccggacgtgatggcggtccccgccgaaagtctcgacgcgatgctc
gcgcagctcggcctcgcctga
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