Phreatobacter cathodiphilus: C6569_18125
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Entry
C6569_18125 CDS
T05356
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
phr
Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_18125 (addB)
Enzymes [BR:
phr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6569_18125 (addB)
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C6569_18125 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AVO46825
UniProt:
A0A2S0NF95
LinkDB
All DBs
Position
complement(3788407..3791472)
Genome browser
AA seq
1021 aa
AA seq
DB search
MAIHPRVLTIPASRPHLRTLAEAILAGRVVPGWPDPADPLSLAAGTVLLPNRRACRTMRD
IFAELTPGGAVLLPRITPIGDVDEDEWAFADPMPLDVLGLAAIGPAMPGLDRRLTLATLV
RRWAESVDRAVMRLKGDDPLIVSTATSDALSLAADLMRLMDQVATERVPWSNLDGIVDAG
LDEFWQITRAFLAIARDHWPAHLAALGQEEPAIRRDRIIAAETIRLAATPGPLVAAGSTG
SIPATRDLLRMVAQHPRGALVLPGLDTDLDRASWEAIGGTPGAAGHAHPQFGLKRLVAHV
GIDREAVEALAPPAAFGREALVSAAMRPAATTDLWAQARPAVAEEALAGLNVIEAANERE
EALAIAVVLRELAENPTRDAALVTPDRALARRVVAELARWNVAVDDSGGQPLSGTPAATV
ARLSAALALGEPAPPDLLALLAHPALACDDPAGRDAAIAAIELRALRGLRPTGGLSGFAR
LLDEALPNGRPRPEDAASRVTAEGLAAGRELLDRTIAALEPLAGLDRRAPIAAFAEAHRD
VMRRLVLDDAAVGAEAVLALLDDLAASPPAAGFALTRDDYPAALDALMQTETIRLPANPG
ARIRILGLVEARLLHVDCVVLAGLVEGSWPGQTRLDPWLNRAMRASFGIDPPERRVGLAA
HDFCQLLGQRQVVLTRATKAGGVPTVPSRWMQRLAVVLGEEVWTGLRARGDEVLALAQAL
DAVERPRPIARPNPAPPLALRPTRLSVTEIETLQRDPYAVYARHVLKLRALEALDQVPGA
VERGIVIHGALDAYTREASAGPVADPVARLVALGRDAFRPYWDDPSVRAVWWPRYLRIAA
WFAGADADRRKLFAAAHAERSGHLDFETPAGRVFRLTTKADRIDVTEDGRAEIVDYKTGS
VPSNPQVNAGLAPQLALEAAVLKAGGFAELHPDLIVSALVYAKLGGRDPAGEFSPVKVTG
GDVEGLVAETLAGLKQLVAAYEDERRGYLSWAMPQYVGGRSNDYAHLARVKEWSTGTGEG
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcatccgcgcgtgctgacgattcccgcctcgcgtccgcatctgcggacgctg
gcggaggcgatcctggccggccgggtcgtgcccggctggccggaccccgccgatcccctg
tcgctcgcggccggcaccgttctcctgccgaaccggcgcgcctgccggaccatgcgcgac
atcttcgcagagctgacgcccggcggcgcggtgctgctgccgcggatcacgcccatcggc
gacgtcgacgaggacgaatgggccttcgccgacccgatgccgctcgacgtcctcggcctc
gccgccatcggcccggccatgcccgggctcgaccggcgactgacgctggcgacgctcgtc
aggcgttgggcggagagcgtcgaccgggcggtgatgcggctcaagggcgacgacccgctg
atcgtctccaccgccacgtccgacgccctgtcgctcgccgccgacctgatgcggctgatg
gaccaggtagcgaccgagcgggtgccctggtcaaacctcgacggcatcgtcgatgccggg
ctcgacgagttctggcagatcacgcgcgccttcctcgccatcgcccgcgaccactggccg
gcccacctcgccgcactcggccaggaggagccggcgatccgccgcgaccggatcatcgcc
gccgagacgatccgcctcgccgcgacgcccggcccgctggtggcggcgggctcgacgggc
tcgatcccggcgacgcgcgacctcctgcgcatggtggcgcagcatccgcgcggggccctg
gtcctgcccggcctcgacaccgacctcgacagggcctcgtgggaggcgatcggcggcacg
ccgggcgcggccggccacgcccacccgcaattcggtctgaagcgcctcgtcgcccatgtc
ggcatcgaccgcgaggcggtggaggcgctggcgccgcccgccgccttcggccgggaggcg
ctggtctccgccgccatgcgaccggcggcgaccacggacctgtgggcgcaggcccggccc
gccgtcgccgaggaggcgctggcggggctgaacgtgatcgaggcggccaacgagcgcgag
gaggcgctcgccatcgccgtggtgttgcgcgagttggcggaaaatcccacccgcgacgcc
gccctggtgacgccggaccgggcgctggccaggcgcgtggtcgccgaactcgcccgctgg
aacgtggcggtggacgattccggcggccagccgctctccggcaccccggcggcgacggtg
gcgcggctctcggcggcgctcgccctcggcgagcccgcgccgcccgacctcctggcgctc
ctcgcccatccggcgctcgcctgcgacgaccccgcggggcgcgacgcggccatcgccgcg
attgagctcagggcgctccggggcctgaggccgaccggcgggctctccggcttcgcccgg
ctgctcgacgaggccctgccgaacggacggccccggcccgaggacgcggcgagccgggtc
accgcggaaggcctcgccgcggggcgggagctgctcgaccgcaccatcgcggcgctggag
ccgctggccggcctcgaccgccgggcgcccatcgccgccttcgccgaagcacatcgggac
gtgatgcggcgcctcgtcctcgacgatgcggcggtcggcgccgaggccgttctcgccctg
ctcgacgatctcgcggcctcgccgcccgcggccggtttcgccctgacgcgcgacgactat
cccgccgccctcgacgcgctgatgcagaccgagaccatccgcctaccggccaatccgggg
gcgcggatccgcatcctcggcctcgtcgaggcccgcctcctccacgtcgactgcgtcgtg
ctggccggcctggtggagggctcgtggccgggccagacgcggctcgatccctggctcaac
cgggcgatgcgggcgagtttcggcatcgatccgccggagcgccgggtcggcctcgccgcc
cacgacttctgccagctcctcggccagcggcaggtggtgctgacgcgggcgaccaaggcg
ggcggggtgccgaccgtgccctcgcgctggatgcagcgtctcgccgtggtgctcggggaa
gaagtctggacggggcttcgcgcccgcggcgacgaggtcctcgcgctcgcgcaggcgctc
gacgcggtggagcggccgcggccgatcgcgcggccgaacccggcgccgcccctggcgctc
cggccgacgcggctttcggtcaccgagatcgagacgctgcagcgcgacccctatgccgtc
tatgcccgccacgtgctgaagctcagggcgctggaggcgctggaccaggtgcccggcgcg
gtggagcgcggcatcgtcatccacggcgcgctggacgcctatacccgcgaggcttcggca
ggcccggtggccgatcccgtcgcccgcctcgtcgccctcggccgcgacgccttccggccc
tattgggacgatccctcggtgagggccgtgtggtggccgcgctacctgcgcatcgccgcc
tggttcgccggtgccgacgccgaccggcgcaagctcttcgccgccgcccatgcggagcga
tccggccacctcgacttcgagacgccggcgggccgggtgttccggctgacgaccaaggcg
gaccgcatcgacgtgacggaggacggacgggccgagatcgtcgactacaagaccggcagc
gtgccgagcaatccgcaggtcaatgccggcctggcaccgcagctggcgctggaagcggcc
gtgctgaaggccggcgggttcgccgagctgcaccccgacctcatcgtctccgccctggtc
tatgccaagctcggcggccgcgacccggccggcgagttctctcccgtcaaggtcacgggc
ggcgacgtggagggcctcgtggccgagaccctggccgggctgaaacagctcgtcgccgcc
tatgaggacgagcggcgcggctatctctcctgggccatgccgcaatatgtcggcggacgg
tcgaacgactacgcccatctcgcccgcgtcaaggaatggtccaccgggacgggagagggc
gaatga
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