Phreatobacter cathodiphilus: C6569_20205
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Entry
C6569_20205 CDS
T05356
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00300
Lysine biosynthesis
phr00470
D-Amino acid metabolism
phr01100
Metabolic pathways
phr01110
Biosynthesis of secondary metabolites
phr01120
Microbial metabolism in diverse environments
phr01230
Biosynthesis of amino acids
Module
phr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C6569_20205
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C6569_20205
Enzymes [BR:
phr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C6569_20205
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AVO47179
UniProt:
A0A2S0NG78
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Position
4204352..4205218
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AA seq
288 aa
AA seq
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MSPLANHSFWKMNGAGNEIVVVDLRASTHVVTATEARAIAADERSRFDQMMVLHRPRTPG
TRCYIRIYNTDGSEAGACGNGTRCVAWVLAEEDGAESFTVETVAGLLACRRVGPHAFSVD
MGEPRFGWQDIPLAEEFRDTRAIELQIGPIDAPVLHSPSVVSMGNPHAVFWVDDPYAYDL
PKIGPMLENHPIFPERANISLAAVKTRDHIVLWVWERGVGITRACGSAACAVLVSAARTK
RTGRAATVSLPGGDLFVEWREDNHVIMTGPTELEHQGTFPPTLFATAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgctcgccaaccattcgttctggaagatgaacggcgccggcaacgagatcgtc
gtcgtcgatctgcgcgcctcgacccatgtggtcacggcgacggaggcgcgcgccatcgcc
gccgacgagcgctcgcgcttcgaccagatgatggtgctgcaccggccgcgcacgccgggc
acgcgctgctacatccgcatctacaacaccgacggcagcgaggcgggcgcctgcggcaac
ggcacgcgctgcgtcgcctgggtgctggccgaggaggacggcgccgagagcttcaccgtc
gagacggtcgcgggccttctcgcctgccgccgcgtcgggccccacgccttctccgtcgac
atgggcgagccgcgcttcggctggcaggacattcccctcgccgaggagttccgcgacacc
cgcgccatcgagctgcagatcgggcccatcgacgctccagtcctccattcgccgtcggtc
gtctccatgggcaatccgcacgccgtcttctgggtcgacgatccctatgcctacgacctg
ccgaagatcggccccatgctggagaaccacccgatcttccccgagcgcgccaacatctcg
ctggccgcggtgaagacgcgcgaccacatcgtcctctgggtctgggagcgcggcgtcggc
atcacccgcgcctgcggctcggccgcctgcgccgtcctcgtctcggcggcgcgcaccaag
cgcaccggccgcgccgccaccgtgtcgctgccgggcggcgacctcttcgtcgaatggcgc
gaggacaatcacgtcatcatgaccgggccgaccgagctcgagcaccagggcaccttcccg
cccaccctcttcgccacggcggcctga
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