Phreatobacter cathodiphilus: C6569_20870
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Entry
C6569_20870 CDS
T05356
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr00061
Fatty acid biosynthesis
phr00071
Fatty acid degradation
phr01100
Metabolic pathways
phr01212
Fatty acid metabolism
phr02024
Quorum sensing
phr04146
Peroxisome
Module
phr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C6569_20870
00071 Fatty acid degradation
C6569_20870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C6569_20870
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6569_20870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phr01004
]
C6569_20870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phr04147
]
C6569_20870
Enzymes [BR:
phr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C6569_20870
Lipid biosynthesis proteins [BR:
phr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C6569_20870
Exosome [BR:
phr04147
]
Exosomal proteins
Exosomal proteins of breast milk
C6569_20870
Exosomal proteins of breast cancer cells
C6569_20870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVO47806
UniProt:
A0A2S0NIH0
LinkDB
All DBs
Position
complement(4341386..4343224)
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AA seq
612 aa
AA seq
DB search
MAREAASPAAADPAAALPPLSVVQMLKKHASERGNEVALRQKRFGIWRPTTYAEYWLRSC
HVALGFRALGLEPKGHVGVISENRIEWVLSQMGAGVLGAVTVGVYPTSPSNEVAYVLDHA
DCTIVVCEDQEQIDKVVEARADLPKVKKIVALEDRGLAGYEPGLVMTFDEVEALGRAEYE
KNPGIVDELMRDHRLSDIALLIYTSGSTGKPKGAMLSFRNIRAGANGLLDRYGIGTGWTA
LSYLPLCHVAEQATTVFAPLYAGSRVDFGESLRTVQEDLREVAPTSFLGVPRIWEKMHSG
IRVKMYEARPVQKWLYKTAFDLCEPFADKPRSSWSLAERAKYGLAYVTVFRALKNAIGLT
RCRIAFTGAAPISPEVIRFFRTIGVPLVEIYGMTETSGGILGQTPDDVVVGTVGKAMKGT
QVQLAEDGEIMARGATIFEGYYKNEEATRQTIVDGWLRTGDVAEMQGGHFKIIDRKKDIM
ITAGGKNLSPTEIEHAVKTSPFIKECIVFGDRQKYVAALIQIDMETVGKWAEMKGIAFTN
YKNLSQAPQVVELVQQAVDKANETLAQVANIRRFEILDKELDHDDGEVTATMKVRRKAIE
AKYADAIKRLYA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgaggcggcgagccccgccgcggccgatcccgccgccgccctgccgccgctc
tcggtggtgcagatgctgaagaagcacgcgagcgagcgcggcaacgaggtggcgctgcgc
cagaagcgcttcggcatctggcggccgaccacctatgccgaatactggctgcgctcctgc
cacgtcgccctcggcttccgggcgctgggcctcgaaccgaaggggcatgtcggcgtcatc
tccgagaaccgcatcgaatgggtgctctcgcagatgggcgccggcgtgctcggcgccgtc
accgtcggcgtctatcccaccagcccctccaacgaggtggcctatgtgctcgaccatgcc
gactgcaccatcgtcgtgtgcgaggaccaggagcagatcgacaaggtggtggaggcccgc
gccgacctgccgaaggtgaaaaagatcgtcgccctggaggaccgcggcctcgccggctac
gagccggggctggtcatgaccttcgacgaggtcgaggccctcggccgcgcggagtacgag
aagaacccgggcatcgtcgacgagctgatgcgcgatcaccggctctcggacattgctcta
ttgatctatacatccggatcaaccggcaagccgaagggggccatgctctccttccgcaac
atccgcgccggcgccaacggcctcctcgaccgctacggcatcggcaccggctggaccgcg
ctctcctacctgccgctctgccacgtggcggagcaggcaaccaccgtcttcgcgccgctc
tatgccggcagccgggtcgatttcggcgaatccctccgcaccgtgcaggaggacctgcgc
gaggtcgcgcccaccagcttcctcggcgtgccgcgcatctgggagaagatgcattcgggc
atccgggtgaagatgtacgaggcgcgccccgtgcagaaatggctctacaagaccgccttc
gacctctgcgagcccttcgccgacaagccgcggtcgagctggtcactggccgagagggcc
aagtatggcctcgcctacgtcacggtgttccgggcgctgaagaacgccatcggcctcacc
cgctgccgcatcgccttcaccggcgcggcgccgatctcgccggaggtgatccgcttcttc
cgcaccatcggcgtgccgctggtggagatctacggcatgaccgagacctccggcggcatc
ctcggccagacgcccgacgacgtcgtcgtcggcacggtcggcaaggccatgaagggcacc
caggtccagcttgccgaggacggcgagatcatggcccgcggcgccactatcttcgagggc
tactacaagaacgaggaagccacccgccagaccatcgtcgatggctggctgcgcaccggc
gacgtcgcggagatgcagggcggccacttcaagatcatcgaccgcaagaaggacatcatg
atcaccgccggcggcaagaatctgtcgccgaccgagatcgagcatgcggtgaagacgagc
ccgttcatcaaggagtgcatcgtcttcggcgaccggcagaaatatgtcgcggccctcatc
cagatcgacatggagacggtcggcaaatgggccgagatgaagggcatcgccttcaccaac
tacaagaacctgtcgcaggccccgcaggtggtcgagctcgtccagcaggcggtggacaag
gccaacgagaccctcgcccaggtcgccaacatccgccgcttcgagatcctcgacaaggag
ctcgaccacgacgacggcgaggtgaccgcgacgatgaaggtgcgccgcaaggccatcgag
gcgaaatacgccgacgccatcaagcgcctctacgcctga
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