Phreatobacter cathodiphilus: C6569_20950
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Entry
C6569_20950 CDS
T05356
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6569_20950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_20950
Enzymes [BR:
phr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6569_20950
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6569_20950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
AAA_22
HHH_5
AAA_29
nSTAND3
NTPase_1
RsgA_GTPase
AAA_28
AAA_16
ABC_tran
T2SSE
cobW
TraI_hel_assoc_N
NACHT
ATP-synt_ab
ATPase_2
UvrD-helicase
AAA_5
AAA_24
NPHP3_N
DEAD
MeaB
AAA_25
TrwB_AAD_bind
AAA_17
Zeta_toxin
AAA_14
SLFN-g3_helicase
AAA_18
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVO47312
UniProt:
A0A2S0NGM6
LinkDB
All DBs
Position
complement(4360535..4362721)
Genome browser
AA seq
728 aa
AA seq
DB search
MRAGAAPSSDSPLETLTGTIERVTFHSPATGFAVLKVRVRGKPQPVSIVGTTSAVAAGEM
MTAEGSWVNDRTHGLQFKAARLVTAPPASKDGIERYLASGAIKGIGIATAHKIVQAFGKR
TFEVLDTEPHRLKEIVGLTDARIRRITESWTEDRIVRDLGVFLQEHGLGLGQAARVFRAL
GTEAIGLIRQDPYRLARDVRGIGFLTADQVAVSLGLARDAPERLRAGITYALQEARDDGH
TGLPREEAVALAARLLDGDTARIEEAAAAEVAARNLVADTIGGEPHLFLKDLHRAEKIIG
ERLRDLAKGSPPWGKIDLDTEVPRVEARTGKALAPSQREALATILAAKVSVITGGPGVGK
TTLLDTILKLLTRQDVSVVLAAPTGRAAKRMTEQTGIEAKTIHRLLEIDPEFGAFSRGRE
NLIDCDLLVVDETSMVDVPLMLALVEALPADAGLLLVGDVDQLPPVGPGQALADIIASGL
VPVARLTEVFRQAEASRIIATAHRINRGEMPEAVPAGAESDFYWVEASTPESGLAKIIEM
VKERIPRRFGLDPMRDVQVLAPMNKGVLGARNLNVELQKVLNPPAGRSIERYGWTYAAGD
RVMQTANDYDRDVFNGDLGQVLRIDQEEGELVALFDGRQVSYSFGDLENLMPAYATTIHK
SQGSEYPAVVIPVTTQHYAMLARNLIYTAVTRGRSLVVMVGETRALRIAVDGGRMKPRVT
KLREWLEG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgggcgccgccccgtcctccgacagcccgctggagaccctgacgggcaccatc
gagcgcgtcaccttccattcccccgcgaccggtttcgcggtgctgaaggtgcgcgtgcgc
ggcaagccgcagccggtctccatcgtcggcaccacctcggcggtggcggccggcgagatg
atgacggccgaaggctcctgggtgaacgaccgcacccacggcctgcagttcaaggcggcg
cgcctcgtcaccgccccgcccgcctccaaggacggcatcgagcgctacctcgcctccggc
gccatcaagggcatcggcatcgccaccgcccacaagatcgtccaggccttcggcaagcgc
accttcgaggtgctcgacaccgagccgcaccggctcaaggagatcgtcggcctcacggat
gcccgcatccgccgcatcaccgagagctggaccgaggaccgcatcgtccgcgacctcggc
gtcttcctgcaggagcacggcctcggcctcggacaggcggcccgcgtcttccgggcgctc
ggcaccgaggccatcggcctcatccgccaggacccctaccgcctcgcccgcgacgtgcgc
ggcatcggcttcctcaccgccgaccaggtggcggtgtcgctggggcttgcccgcgacgcg
ccggagcgcctgcgcgccggcatcacctatgccctccaggaggcgcgcgacgacggccat
accggcctgccgcgcgaggaggcggtggcgctggccgcccgcctgctcgacggcgacacc
gcgcggatcgaggaggcggccgcagccgaggtggccgcccgcaacctcgtcgccgacacc
atcggcggcgagccgcacctgttcctcaaggacctgcaccgggccgagaagatcatcggc
gagcggctgcgcgacctcgccaagggatcgccgccctgggggaagatcgatctcgacacc
gaggtgccgcgcgtcgaggcgcgcaccggcaaggccctcgcgccctcgcagcgcgaggcg
ctggcgaccattctcgccgccaaggtgtccgtcatcaccggcggcccgggcgtcggcaag
acgacgctgctcgatacgatcctgaagctcctcacccgccaggacgtgtcggtcgtgctc
gccgcccccaccgggcgcgccgccaagcgcatgaccgagcagaccggcatcgaggcgaag
accatccaccgcctgctggagatcgatccggaattcggcgccttctcccgcggtcgcgag
aacctcatcgactgcgatctgctggtggtcgacgagacctccatggtcgacgtgccgctg
atgctcgccctcgtcgaggcgctgccggccgatgccggcctgctgctcgtcggcgacgtc
gaccagttgccccccgtcggacccggccaggcgctcgccgacatcatcgcctcggggctg
gtgccggtggcacggctgacggaggtcttccgccaggcggaagccagccgcatcatcgcc
accgcccaccgcatcaaccgcggcgagatgccggaggccgtgccggcgggggcggagagc
gatttctattgggtcgaggcctccacgcccgagagcggcctcgccaagatcatcgagatg
gtcaaggagcgcatcccgcgccgcttcggcctcgacccgatgcgcgacgtgcaggtgctg
gcgccgatgaacaagggcgtgctcggcgcccgcaacctcaacgtcgagctgcagaaggtg
ctcaatcccccggccggccgctccatcgagcgctacggctggacctatgctgccggcgac
cgcgtcatgcagaccgccaacgactacgaccgcgacgtcttcaacggcgatctcggccag
gtgctgcgcatcgaccaggaggagggcgaactcgtcgccctcttcgacggccggcaggtc
tcctattccttcggggacctggaaaacctcatgcccgcctatgccaccaccatccacaag
agccaggggtcggaatatccggcggtggtgatcccggtgacgacgcagcactacgcgatg
ctggcgaggaacctcatctacacggcggtgacgcgcggccggtccctcgtcgtcatggtc
ggcgagacccgcgccctgcgcatcgcggtggatggcggccgcatgaagccgcgggtgacc
aagctcagggaatggctggaggggtag
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integrated database retrieval system
