Phreatobacter cathodiphilus: C6569_21180
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Entry
C6569_21180 CDS
T05356
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6569_21180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phr03400
]
C6569_21180
Enzymes [BR:
phr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C6569_21180
DNA repair and recombination proteins [BR:
phr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6569_21180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AVO47814
UniProt:
A0A2S0NI32
LinkDB
All DBs
Position
4403441..4404841
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AA seq
466 aa
AA seq
DB search
MVQIRLGPGADLDGFRAAARSLVAAGTPPEAVVWTQGGAADLFGAPVLPDGPPLSLPRAA
ADLVQLVVCHRDPERFGLLYRLIWRLTHGEKALLEVMSDPLVHRLAMMGKAIRRDLHKMH
AFLRFRRVETAKGERFVAWFEPDHHILAAAAPFFRNRFGSLDWTILTPEGRVSWTGGALV
FGPAATRDEAAAGDGFEEGWRDYYESTFNPARLNTTAMRAEMPKKYWRNMPETAAIPGMV
RAALSRVDGMMEREPAMPTRRNPDKAVAAMQEAGPHSLEELNRIISGSEPLVPGATRAVL
GEGPVGAAIAFVGEQPGDQEDLQGRPFVGPAGQLLDRALAEAGIERSATYLTNAVKHFKF
VQRGRRRIHESPTAGEVKHYRWWLERELDLVRPGLVVALGATAALALAGKAVPVGRNRGL
FRFGDRPGFLTVHPSSLLREPDPQAREEGFRRYCEDMRRIRELAAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagatccgtcttgggccgggcgccgatctcgacggcttccgcgccgccgcccgc
agcctcgtcgccgccgggaccccgccggaggcggtggtctggacgcagggcggggcggcc
gatctcttcggcgcgccggtccttcccgacgggccgccgctcagcctgccgcgggccgcg
gccgacctcgtccagctcgtcgtctgccaccgcgatcccgagcgcttcggcctcctctac
cggctgatctggcgcctcacccacggcgagaaggcgctgctcgaggtgatgagcgacccg
ctcgtccaccgcctcgccatgatgggcaaggccatccgccgcgacctccacaagatgcac
gccttcctgcgcttccgccgcgtcgagaccgcgaagggcgagcgcttcgtcgcctggttc
gagcccgaccaccacatcctcgccgccgccgcgcccttcttccgcaaccgcttcggcagc
ctcgactggaccatcctcacccccgagggccgggtgagctggaccggcggcgcgctcgtc
ttcggcccggccgccacccgcgacgaggcggcggccggcgacggtttcgaggagggctgg
cgcgactattacgagagcaccttcaaccccgcccgcctcaacaccacggcgatgcgcgcc
gagatgccgaagaaatactggcgcaacatgccggagacggcggccatccctggcatggtg
cgcgccgccctctcgcgcgttgacggcatgatggagagggagcccgccatgccgacgaga
cgcaatccggacaaggccgtcgccgccatgcaggaggcggggccccactcgctcgaggag
ctgaaccgcatcatatcgggctccgagccgctcgtgccgggcgccacccgcgccgtgctg
ggggaggggccggtgggcgccgccatcgccttcgtcggcgagcagccgggcgaccaggag
gacctccagggccgccccttcgtcggccccgccggccagcttctcgaccgcgccctggcc
gaggccggcatcgagcggtccgccacctatctcaccaatgcggtgaagcacttcaagttc
gtgcagcgcggccggcgccgcatccatgaatcgcccaccgccggcgaggtgaagcactat
cgctggtggctggagcgcgagctcgatctcgtccggccgggcctcgtcgtggcgctcggc
gccaccgccgcgctggcactcgccggcaaggccgtaccggtcggccgcaaccgcggcctc
ttccgcttcggcgaccggccgggcttcctcaccgtccacccctcctcgctgctgcgcgag
cccgatccgcaggcgcgcgaggaggggttccgccggtattgcgaggacatgaggcgcatc
cgcgagctcgccgcggcgtga
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