Paenarthrobacter sp. R1: QN084_01935
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Entry
QN084_01935 CDS
T10646
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz03410
Base excision repair
phrz03430
Mismatch repair
phrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QN084_01935
03430 Mismatch repair
QN084_01935
03440 Homologous recombination
QN084_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phrz03400
]
QN084_01935
DNA repair and recombination proteins [BR:
phrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QN084_01935
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QN084_01935
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QN084_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WIV31411
LinkDB
All DBs
Position
complement(398261..400186)
Genome browser
AA seq
641 aa
AA seq
DB search
MTILQTVDDHSLTDDGVDLFTLMCQRRGWTDEYLREIESAEHDELLGLAEMVEALEDART
AGHKVTIAPDFDMDGISSGVLGYAGLSELGFDVELHLPDYRRGHDLTPEDIAEIAATWPD
TKVLLTCDGGVNSHRGIAAARAMGWKTLVTDHHEELEPGSSADVTVDPCRMDETYANTGI
CGAHVLYQVLEAYARVHRPEKLWEIRLLRLFAGLGTVSDVMPVLYENRQLVRDSLSIARL
LYAPAPRTVPTPWGFDPDPEAIDVGQATLMHLLRVDPHHPAFVRAFEGFAVLLKAFGQAG
KVRDIDSIDEGFYGFYLAPAMNSPRRTGDPLAPCFGVFTAPDQDLMLEAAHQVIATNESR
KELVEVHTRELEEGDQPLAPWVYFSEAYPGMYGLLANRLMERHGHPVVVLNRPAGPDDYV
GGSGRAPSWFGIIDTLEHQDGMRAIGHQQACGVKVDRAELLDGLVEALREATQVALLAVV
QDERRADLVLGPDRDCDAGLDDLEPLVGFVRRVEALRPFGHGFVEPVVEIAVEPLGLRVD
RIGSDTDCGHERTDANLMTNARGYRVCRLCKKHLRLVTRSGLSCLWWNVAEEKEPEISAL
TRSASRTEVGTLRFLAKLQLNTFRGETRVQAVIEEQIPASA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctccagaccgtcgacgaccattcactgacggacgacggcgtcgacttgttc
accctgatgtgccagcgccgcggctggaccgacgagtacctccgcgagatcgaatcagct
gaacacgacgagctcctgggcctggccgagatggtcgaggccctggaggacgcccggacc
gccggccacaaggtcaccatcgcccctgacttcgacatggacgggatctcctccggtgtg
ctcggctacgccggactgtcagagctcggcttcgacgtcgagctgcacctgcccgactac
cgccgcggccacgacctcacgcccgaggacatcgcagagatcgccgcgacgtggccggac
accaaggtcctgctgacctgtgacgggggagtgaactcccaccgcgggatcgccgccgcc
cgggctatgggatggaagaccctggtcaccgaccaccacgaagagctcgaacccggttcg
agcgccgacgtcaccgtcgacccctgccggatggacgagacctacgccaacaccggcatc
tgcggcgcgcacgtgctctaccaggtgttggaggcctatgcccgcgtccaccggccggag
aagctctgggagatccgcctgctgcgcctgttcgccggcctgggcaccgtctccgacgtc
atgcccgtgctgtacgagaaccggcagctggtgcgcgactcgctgtccatcgcacggctg
ctgtacgcgcccgcaccacgcacggtcccgaccccctggggcttcgacccggaccccgag
gcgatcgacgtcgggcaggcgacgctgatgcacctgctgcgcgtcgacccgcaccacccg
gccttcgtccgggccttcgagggcttcgcggtcctgctgaaggccttcggccaggcaggc
aaggtccgcgacatcgacagcatcgacgagggtttctacgggttctacctcgcgccggcg
atgaactccccgcgccgcacgggcgacccgctcgcaccgtgcttcggcgtgttcaccgcg
cctgaccaggacttgatgctcgaggcggcacaccaggtaatcgcgaccaacgagagccgc
aaggagcttgtcgaggtccacacccgggagctcgaggagggtgatcagccgctggctccc
tgggtctacttctccgaggcctacccgggcatgtacggcctgctcgccaaccggctgatg
gagcgccacggccacccggtcgtcgtgctcaaccgtcccgccgggccggatgactacgtc
ggcggctccggccgggcaccgtcgtggttcggcatcatcgacacgctcgagcaccaggat
ggcatgcgcgccatcggccaccagcaggcctgcggcgtcaaggtcgaccgggcggaactg
ctcgacggcctggtcgaagcattgcgggaggccacgcaggttgccctgctggctgtcgtc
caggatgagcgccgggccgacctggtcctgggcccggaccgggactgcgatgctggcctg
gacgacctggagcctctggtcggcttcgtccggcgtgtggaagcgctgcggcccttcggc
catggcttcgtcgagccggtggtcgaaatcgctgtcgagcccctcgggctgcgggtggac
cggatcggctccgataccgactgcggccatgagcgtaccgacgccaacctgatgaccaac
gcccgcggctaccgcgtgtgccgcctgtgcaagaagcatctgcggctggtcaccaggtcc
gggctgtcctgcctgtggtggaacgtcgccgaggagaaggaaccggagatttcggctctg
acgcggtcggccagccgcaccgaggtcggaacgctgcgtttcctcgcgaagctgcagctg
aacaccttccgcggcgagacccgcgtccaggccgtcatcgaagagcagatccccgcgtct
gcctga
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