Paenarthrobacter sp. R1: QN084_02905
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Entry
QN084_02905 CDS
T10646
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN084_02905 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phrz03021
]
QN084_02905 (rho)
03019 Messenger RNA biogenesis [BR:
phrz03019
]
QN084_02905 (rho)
Transcription machinery [BR:
phrz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QN084_02905 (rho)
Messenger RNA biogenesis [BR:
phrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QN084_02905 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Fyv8
Motif
Other DBs
NCBI-ProteinID:
WIV31587
LinkDB
All DBs
Position
complement(587266..589425)
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AA seq
719 aa
AA seq
DB search
MTETTELASAVDTTSSAAESSTAATTKSSGLAGLKLAQLQALASQLGISGGSRMRKGDLV
NAISAHRAGTPATKAPAKAPSKGSAAAAPKEAPAVEQQPEKSAPAVETAGEAAPQEAPRR
GRGRSRRASSDGVVAAAEAAAAATAEAGSAPAAEAARTEETAAPAAETAEAPAERRQPRT
RNRRRGEAAAAAEAAEAPAAEPRTEQQAEQRSAEQRTEREGRDSRAEQREGRESRADQRE
GRAEQREQAEAGEQPQRERRDNSRNRRDDNDGEDGGNRRNRRNRRDRNEQNDRRGQDSRD
GNSRSERFRDRNERRRGRSQGPDVDDVEVTEDDVLLPVAGILDVLENYAFIRTSGYLPGA
NDVYVSLAQVKKYNLRKGDAVVGAIRAPREGEDRNQQSSRQKFNALVRVTSVNGKTPEEL
KDRVEFAKLVPLYPSERLRLETDPKKIGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQS
IANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELSIERA
KRLVEMGMDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALYPPKRFFGAARNIENG
GSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTRREEN
LLSPEEVKIMWKLRRVLSGLEQQQSLELLTNKIRETQSNVEFLMQVQKTTLGAKSDNDK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaaccactgagctggcttcagctgtggacaccacatcttctgctgccgagtcg
tcaacggccgcaaccaccaagagcagcggccttgccggcttgaagctcgcccaactccag
gctcttgccagccagttgggcatttccgggggatcacggatgcgcaagggtgaccttgtc
aacgcaatttccgcccaccgtgccggcacgccagccaccaaggcgcctgccaaggcaccg
tcgaagggaagcgctgcagctgcccccaaggaagctcctgccgttgagcagcagccggaa
aagtcggctcccgcagtcgaaaccgccggcgaagcagctccccaggaagcaccgcgacgc
ggacgtggacgcagccgccgggcaagcagcgatggcgtcgtggctgcggccgaagccgcc
gctgcggcaacggcagaggctggatcggctcccgccgctgaagccgcacgtaccgaagaa
acggccgctcctgcggccgaaaccgcggaagctcctgccgagcgccgtcagccccgcacc
cgcaatcgccgtcgtggtgaagccgccgctgcagccgaggcggcagaggcacccgctgcc
gaaccgcgtacggagcagcaggccgagcagcggtccgctgaacagcgcactgagcgtgaa
ggccgcgacagccgtgcagagcagcgtgaaggccgcgaaagccgcgccgaccagcgtgaa
ggccgtgccgagcagcgcgaacaggctgaagccggtgaacagccgcagcgtgaacgccgc
gacaactcccgcaaccgccgtgacgacaacgacggcgaagacggcggcaaccgccgtaac
cgccgcaaccgtcgcgaccgcaacgagcagaacgaccgccgaggccaggacagccgcgac
ggcaacagccgcagcgaacgcttccgtgaccgcaatgagcgccgccgcggacgttcccag
ggaccggacgtagacgacgtcgaggtcactgaagacgacgtgctgctgcccgtcgcaggc
atcctggacgtcctggagaactacgcgttcatccgcacctccggctaccttccgggagcc
aacgatgtttacgtatcgctcgcccaggtcaagaagtacaacctgcgtaagggcgacgcc
gtggtcggtgccatccgtgcgccgcgcgaaggcgaagaccgcaaccagcagtcgtcccgc
cagaagttcaacgccctggtccgggtcacgtcggtaaacggcaagactcccgaggagctc
aaggaccgcgttgaattcgccaagcttgtgccgctctacccctcggagcgactccgcctc
gaaacggacccgaagaagatcggcccccgtgtcatcgacctcgtggctcccatcggcaag
ggccagcgtggcctcatcgtctccccgcccaaggccggcaagacgctgatcctgcagtcc
atcgcgaatgccatcaccaccaacaatcctgaggtccacctcatgatggtgctggttgac
gaacgccctgaagaagtcaccgacatgcagcgcaccgtcaagggtgaggtcattgcctcc
accttcgaccggcctgcagacgaccacaccacggtcgccgaactttcgatcgaacgtgcc
aagcgcctcgttgaaatgggcatggatgttgttgtcctcctcgattccatgacccgactc
ggacgtgcgtacaacctcgcagcaccggcctccggacgcatcctgtccggtggtgtggat
tccgcagccctgtacccgcccaagcgcttcttcggcgccgcccgcaacatcgaaaacggc
ggttcgctgaccatcctggcaacggccctcgtggaaaccggttccaagatggacgaggtc
atcttcgaagagttcaagggcacgggcaacatggaattgcgcctgtcccgccagttggct
gacaagcgcatcttcccggccgtggacgtcaacgcctccggtacccgccgcgaagagaac
ctgctctccccggaagaggtcaagatcatgtggaagctgcgcagggtcctctccggcctg
gaacagcagcagagccttgaactgctgaccaacaagatccgggaaacgcaaagcaacgtc
gagttcctcatgcaggtccagaagacgacgcttggagcgaagtcggacaacgacaaatag
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