Paenarthrobacter sp. R1: QN084_03565
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Entry
QN084_03565 CDS
T10646
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz03420
Nucleotide excision repair
phrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QN084_03565
03430 Mismatch repair
QN084_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phrz03400
]
QN084_03565
Enzymes [BR:
phrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QN084_03565
DNA repair and recombination proteins [BR:
phrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QN084_03565
MMR (mismatch excision repair)
Other MMR factors
QN084_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
C1_1
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WIV33236
LinkDB
All DBs
Position
complement(739885..742005)
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AA seq
706 aa
AA seq
DB search
MTPADGTLEARILGGLDEEQREVASTLTGPICVLAGAGTGKTRAITHRIAYGVHSGVYSP
QRLLAVTFTARAAAEMRSRLRDLGVPNVQARTFHAAALRQLQFFWPQAIGGTLPSLLDHK
ANMIAEASRRLRLTTDRASIRDLAAEIEWAKVSMLTPANYLENAQGRGTPGGLDLTAVSR
VFQAYEDIKTDRNVIDFEDVLLITVGILQEDPKVAATVREQYRHFVVDEYQDVSPLQQRL
LDLWLGERDELCVVGDASQTIYSFTGASPQHLLGFKARYPKATVVKLIRDYRSTPQVVKL
ANDLLGSRRSGGPAADAAWAPPLKLVAQRPVGPDPRFVECPDDEAEAAVVAGKIQELLNA
GVKASEIAILFRTNGQSEAYEQALASAGIGYQLRGGERFFARKEVRDAILQLRAATRAVA
EGPQETLGQVVRDIIASLGYTENAPHSGGALRERWESLAALVALADELSATRGESFTLAE
FVNELQERSVAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLSEGLMPISFADSPEDVDEE
RRLLYVGITRAREHLNLSWSTARTPGGRANRKPSRFLDGLRPDSVATANARSSAGKPRRK
AAAPASCRVCGSMLATGAERKVGRCNQCPPSYEEQTFEALRQWRREEAQSADVPAYVVFT
DATLTAIAEARPGSLEQLAGLAGVGPSKLERYGEAVLQVIEQSSGH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggccgacgggacacttgaggccagaatccttggcggcctggacgaggaacaa
cgcgaggtagccagcaccctgacggggccgatctgtgtcctggccggtgccggcaccggc
aagacccgtgccattacgcaccgcatcgcgtatggggtgcattcgggcgtgtactcacca
cagcggctgctggctgtcaccttcaccgcccgcgctgctgctgaaatgcgcagcaggctc
agggaccttggcgtacccaacgtgcaggcacgcacgttccacgctgcggcgctgcggcag
cttcagttcttctggccacaagccatcgggggcacgctgcccagcctcctcgaccacaag
gcgaacatgattgcggaggcctcccgccgccttcgcctgaccaccgaccgcgcatccatc
agggacctcgccgcggaaatcgaatgggcgaaggtctccatgctgacgccagccaattac
ctggaaaacgcgcagggccgcggtactcctggcggcttggacctcacggccgtctcgcgc
gtgttccaggcctatgaggacatcaaaacggaccggaacgtcattgacttcgaggacgtc
ctgctgattaccgttgggatcctgcaggaagatcccaaggtggccgctacggtgcgggag
caataccgccacttcgtggtggatgagtaccaggacgtctcaccgctgcaacaacggctt
ctggatctctggctcggcgaacgcgacgaactgtgcgtggtgggcgatgccagccagacc
atctactccttcaccggtgcttccccccaacacctcctgggtttcaaggcgcggtacccc
aaagccacggtggtcaagctcatccgcgactaccggtcaacgccccaagtggtcaagctg
gccaatgacctccttggctcgcgccggagcggcggccctgcggccgatgcagcctgggcg
ccgccgctcaaacttgttgcccagcggcctgtaggacccgatccccggttcgtggagtgc
cctgacgacgaggcagaagcagcagtcgtggcagggaagatccaggagctgctcaacgcc
ggagtcaaggccagcgagatcgctatcctgttccggaccaacggccaatccgaagcctat
gaacaagcgttggcctcggcaggaatcggctatcaactccgcggcggagagcggttcttt
gcacgcaaggaagtccgtgacgccatcctccagttgagggcggctacccgggcagtggcg
gagggcccgcaggagaccctcggccaagttgtgcgggacatcatcgcttccctgggttat
acggagaatgccccgcacagcggcggggcgttgcgcgaacggtgggagtccttggcggcg
ctggtggcattggcggatgagctttccgccaccaggggagagagcttcaccctcgctgag
tttgtcaatgagctccaggaacgttccgtggcccaacacgctcccacggtgcagggcgtt
acccttgcctccctgcatgccgcgaaaggcctggaatgggatgccgttttcctggtaggg
cttagtgaaggcctcatgcccatttcttttgccgattcacccgaggacgtggacgaggaa
cgccggctgctgtatgtcgggatcacccgggcccgcgaacacctcaacctgtcctggtcc
actgcccggacgcccggcggcagggcaaaccgcaagccgtcgcggttccttgacggcctt
cgtcctgactcggtggcaaccgccaacgcccggagcagcgccggtaagccgcggcgaaaa
gcggctgccccggcgtcgtgcagggtttgcggcagcatgcttgcaaccggggcggaacgg
aaggtcggacgctgcaaccagtgcccgccgtcgtacgaggaacagaccttcgaagcattg
cgccagtggcgccgcgaggaggcacaatcagccgatgtgcctgcatacgtcgtcttcacc
gacgccaccttgacagctatcgccgaggcccggcccgggtccttggagcagttggccggg
ctggcaggcgtggggccatcaaagctggagcggtatggggaagcagtactgcaggttatt
gaacagagttccggacactga
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